Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.01□□□□□ -0.49
CMC4P56277 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC12.01□□□□□ -0.49
CMC4P56277 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.01□□□□□ -0.49
CMC4P56277 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 AL139400.1-201ENST00000366220 510 ntBASIC12.01□□□□□ -0.49
CMC4P56277 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.01□□□□□ -0.49
CMC4P56277 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.01□□□□□ -0.49
CMC4P56277 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.01□□□□□ -0.49
CMC4P56277 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.01□□□□□ -0.49
CMC4P56277 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CMC4P56277 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.01□□□□□ -0.49
CMC4P56277 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.01□□□□□ -0.49
CMC4P56277 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
CMC4P56277 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.01□□□□□ -0.49
CMC4P56277 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.01□□□□□ -0.49
CMC4P56277 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.01□□□□□ -0.49
CMC4P56277 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
CMC4P56277 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.01□□□□□ -0.49
CMC4P56277 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.01□□□□□ -0.49
CMC4P56277 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CMC4P56277 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC12.01□□□□□ -0.49
CMC4P56277 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.01□□□□□ -0.49
CMC4P56277 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 PCDHA12-202ENST00000613593 2588 ntBASIC12.01□□□□□ -0.49
CMC4P56277 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC12.01□□□□□ -0.49
CMC4P56277 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12.01□□□□□ -0.49
CMC4P56277 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CMC4P56277 AC008677.1-201ENST00000519230 1561 ntBASIC12.01□□□□□ -0.49
CMC4P56277 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CMC4P56277 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC12□□□□□ -0.49
CMC4P56277 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CMC4P56277 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12□□□□□ -0.49
CMC4P56277 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12□□□□□ -0.49
CMC4P56277 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CMC4P56277 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC12□□□□□ -0.49
CMC4P56277 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12□□□□□ -0.49
CMC4P56277 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
CMC4P56277 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 SPDYE17-201ENST00000412399 783 ntBASIC12□□□□□ -0.49
CMC4P56277 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12□□□□□ -0.49
CMC4P56277 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
CMC4P56277 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12□□□□□ -0.49
CMC4P56277 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12□□□□□ -0.49
CMC4P56277 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12□□□□□ -0.49
CMC4P56277 AC051619.7-201ENST00000568314 623 ntBASIC12□□□□□ -0.49
CMC4P56277 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12□□□□□ -0.49
CMC4P56277 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12□□□□□ -0.49
CMC4P56277 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12□□□□□ -0.49
CMC4P56277 AC073592.8-201ENST00000624126 511 ntBASIC12□□□□□ -0.49
CMC4P56277 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12□□□□□ -0.49
CMC4P56277 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12□□□□□ -0.49
CMC4P56277 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12□□□□□ -0.49
CMC4P56277 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12□□□□□ -0.49
CMC4P56277 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms