Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 AL139400.1-201ENST00000366220 510 ntBASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 KRT18P34-201ENST00000488218 1270 ntBASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 AC069335.1-201ENST00000489972 472 ntBASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCGF1Q9BSM1 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 AC024909.3-201ENST00000611513 2257 ntBASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 CYP2T1P-202ENST00000641596 2535 ntBASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 AC093520.2-201ENST00000561830 333 ntBASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 AC027307.2-201ENST00000591252 911 ntBASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 AL355385.1-201ENST00000606123 409 ntBASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 AC009093.7-201ENST00000623853 1223 ntBASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 LINC02228-204ENST00000642115 2962 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms