Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.06■□□□□ 0.32
ATP2A3Q93084 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
ATP2A3Q93084 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A3Q93084 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A3Q93084 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A3Q93084 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A3Q93084 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A3Q93084 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A3Q93084 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A3Q93084 AL662844.4-201ENST00000606367 2838 ntBASIC17.05■□□□□ 0.32
ATP2A3Q93084 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A3Q93084 AL513523.2-202ENST00000427283 2040 ntBASIC17.05■□□□□ 0.32
ATP2A3Q93084 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A3Q93084 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 AC027369.6-201ENST00000525520 931 ntBASIC17.05■□□□□ 0.32
ATP2A3Q93084 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 AC008761.3-201ENST00000624803 892 ntBASIC17.05■□□□□ 0.32
ATP2A3Q93084 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A3Q93084 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A3Q93084 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A3Q93084 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A3Q93084 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A3Q93084 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A3Q93084 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A3Q93084 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP2A3Q93084 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A3Q93084 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A3Q93084 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A3Q93084 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A3Q93084 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A3Q93084 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A3Q93084 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A3Q93084 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A3Q93084 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A3Q93084 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 LINC02560-201ENST00000596379 459 ntBASIC17.04■□□□□ 0.32
ATP2A3Q93084 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A3Q93084 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A3Q93084 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A3Q93084 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A3Q93084 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A3Q93084 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A3Q93084 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A3Q93084 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A3Q93084 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A3Q93084 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
ATP2A3Q93084 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A3Q93084 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms