Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.3□□□□□ -0.12
AP3S1Q92572 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
AP3S1Q92572 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.3□□□□□ -0.12
AP3S1Q92572 AC124864.1-201ENST00000623408 392 ntBASIC14.3□□□□□ -0.12
AP3S1Q92572 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S1Q92572 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S1Q92572 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S1Q92572 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
AP3S1Q92572 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S1Q92572 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S1Q92572 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S1Q92572 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S1Q92572 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S1Q92572 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S1Q92572 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S1Q92572 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
AP3S1Q92572 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S1Q92572 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
AP3S1Q92572 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.3□□□□□ -0.12
AP3S1Q92572 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S1Q92572 PMPCAP1-201ENST00000508114 1576 ntBASIC14.3□□□□□ -0.12
AP3S1Q92572 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S1Q92572 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S1Q92572 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S1Q92572 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
AP3S1Q92572 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
AP3S1Q92572 AC131009.4-201ENST00000624048 1740 ntBASIC14.29□□□□□ -0.12
AP3S1Q92572 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.29□□□□□ -0.12
AP3S1Q92572 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 U82695.1-201ENST00000635752 1889 ntBASIC14.29□□□□□ -0.12
AP3S1Q92572 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
AP3S1Q92572 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.29□□□□□ -0.12
AP3S1Q92572 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.29□□□□□ -0.12
AP3S1Q92572 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.29□□□□□ -0.12
AP3S1Q92572 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.29□□□□□ -0.12
AP3S1Q92572 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.29□□□□□ -0.12
AP3S1Q92572 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.29□□□□□ -0.12
AP3S1Q92572 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.29□□□□□ -0.12
AP3S1Q92572 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.29□□□□□ -0.12
AP3S1Q92572 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.29□□□□□ -0.12
AP3S1Q92572 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.29□□□□□ -0.12
AP3S1Q92572 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.29□□□□□ -0.12
AP3S1Q92572 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
AP3S1Q92572 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
AP3S1Q92572 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
AP3S1Q92572 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.29□□□□□ -0.12
AP3S1Q92572 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
AP3S1Q92572 AC004817.3-201ENST00000602957 2129 ntBASIC14.29□□□□□ -0.12
AP3S1Q92572 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S1Q92572 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S1Q92572 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S1Q92572 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.28□□□□□ -0.12
AP3S1Q92572 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S1Q92572 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.28□□□□□ -0.12
AP3S1Q92572 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S1Q92572 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
AP3S1Q92572 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S1Q92572 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S1Q92572 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
AP3S1Q92572 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S1Q92572 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S1Q92572 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.28□□□□□ -0.12
AP3S1Q92572 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S1Q92572 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S1Q92572 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S1Q92572 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.28□□□□□ -0.12
AP3S1Q92572 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S1Q92572 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S1Q92572 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.28□□□□□ -0.12
AP3S1Q92572 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.28□□□□□ -0.12
AP3S1Q92572 AC246785.2-201ENST00000432512 513 ntBASIC14.28□□□□□ -0.12
AP3S1Q92572 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
AP3S1Q92572 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.28□□□□□ -0.12
AP3S1Q92572 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.28□□□□□ -0.12
AP3S1Q92572 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.28□□□□□ -0.12
AP3S1Q92572 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.28□□□□□ -0.12
AP3S1Q92572 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S1Q92572 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S1Q92572 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms