Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AC073389.1-201ENST00000595595 795 ntBASIC12.77□□□□□ -0.37
TRGV3P03979 SPTSSB-204ENST00000617024 1292 ntBASIC12.77□□□□□ -0.37
TRGV3P03979 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.77□□□□□ -0.37
TRGV3P03979 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.77□□□□□ -0.37
TRGV3P03979 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
TRGV3P03979 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.77□□□□□ -0.37
TRGV3P03979 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TRGV3P03979 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.77□□□□□ -0.37
TRGV3P03979 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC12.77□□□□□ -0.37
TRGV3P03979 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC12.77□□□□□ -0.37
TRGV3P03979 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TRGV3P03979 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TRGV3P03979 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TRGV3P03979 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.76□□□□□ -0.37
TRGV3P03979 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.76□□□□□ -0.37
TRGV3P03979 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
TRGV3P03979 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.76□□□□□ -0.37
TRGV3P03979 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
TRGV3P03979 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.76□□□□□ -0.37
TRGV3P03979 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.76□□□□□ -0.37
TRGV3P03979 AC098859.1-201ENST00000502915 1238 ntBASIC12.76□□□□□ -0.37
TRGV3P03979 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.76□□□□□ -0.37
TRGV3P03979 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
TRGV3P03979 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
TRGV3P03979 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
TRGV3P03979 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TRGV3P03979 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.76□□□□□ -0.37
TRGV3P03979 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.76□□□□□ -0.37
TRGV3P03979 AC006449.6-201ENST00000612330 2296 ntBASIC12.76□□□□□ -0.37
TRGV3P03979 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.76□□□□□ -0.37
TRGV3P03979 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV3P03979 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
TRGV3P03979 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV3P03979 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV3P03979 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV3P03979 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV3P03979 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV3P03979 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV3P03979 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.75□□□□□ -0.37
TRGV3P03979 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV3P03979 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV3P03979 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
TRGV3P03979 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.75□□□□□ -0.37
TRGV3P03979 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.75□□□□□ -0.37
TRGV3P03979 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV3P03979 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV3P03979 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV3P03979 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV3P03979 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.75□□□□□ -0.37
TRGV3P03979 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV3P03979 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
TRGV3P03979 AL627223.1-201ENST00000416693 442 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms