Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 KRT8P23-201ENST00000560090 1207 ntBASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 AP000842.3-202ENST00000569238 1080 ntBASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
MS4A4EQ96PG1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 ELL2P1-201ENST00000413990 1906 ntBASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 AP005117.1-202ENST00000581724 1908 ntBASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 GPX1P2-201ENST00000429271 606 ntBASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 AP000347.1-202ENST00000435868 847 ntBASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 AC061975.2-201ENST00000581722 295 ntBASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.1■□□□□ 0.01
MS4A4EQ96PG1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 FAM220BP-201ENST00000377689 816 ntBASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 HLA-H-201ENST00000383620 1096 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms