Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 AC002472.2-201ENST00000442739 958 ntBASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 ALG1L8P-201ENST00000533887 760 ntBASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 AC190387.1-201ENST00000551683 408 ntBASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 RN7SL204P-201ENST00000582831 262 ntBASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CCDC33Q8N5R6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC33Q8N5R6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CCDC33Q8N5R6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC33Q8N5R6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CCDC33Q8N5R6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
CCDC33Q8N5R6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC33Q8N5R6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CCDC33Q8N5R6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC33Q8N5R6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC33Q8N5R6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC33Q8N5R6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 AC016027.1-202ENST00000607927 1699 ntBASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 MIR661-201ENST00000384842 89 ntBASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 AL512638.1-201ENST00000457493 794 ntBASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 AC008267.7-201ENST00000624570 1194 ntBASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 AP003680.1-201ENST00000598970 3660 ntBASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC33Q8N5R6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CCDC33Q8N5R6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC33Q8N5R6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CCDC33Q8N5R6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCDC33Q8N5R6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC33Q8N5R6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms