Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 GPR32P1-201ENST00000601788 811 ntBASIC12.29□□□□□ -0.44
MRPL54Q6P161 MMD2-204ENST00000612910 778 ntTSL 5 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 TSPY14P-201ENST00000303979 915 ntBASIC12.28□□□□□ -0.44
MRPL54Q6P161 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 FAM220CP-201ENST00000395253 831 ntBASIC12.28□□□□□ -0.44
MRPL54Q6P161 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 CD81-212ENST00000526072 1172 ntTSL 5 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 ZNF444P1-201ENST00000559497 298 ntBASIC12.28□□□□□ -0.44
MRPL54Q6P161 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 AC005912.2-201ENST00000619492 2400 ntBASIC12.28□□□□□ -0.44
MRPL54Q6P161 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL54Q6P161 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
MRPL54Q6P161 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
MRPL54Q6P161 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
MRPL54Q6P161 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
MRPL54Q6P161 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
MRPL54Q6P161 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
MRPL54Q6P161 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
MRPL54Q6P161 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
MRPL54Q6P161 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.27□□□□□ -0.44
MRPL54Q6P161 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.44
MRPL54Q6P161 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
MRPL54Q6P161 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
MRPL54Q6P161 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
MRPL54Q6P161 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL54Q6P161 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms