Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
PCDH17O14917 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH17O14917 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH17O14917 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PCDH17O14917 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PCDH17O14917 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH17O14917 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDH17O14917 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.51■□□□□ 0.07
PCDH17O14917 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDH17O14917 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDH17O14917 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.51■□□□□ 0.07
PCDH17O14917 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDH17O14917 AC020765.3-201ENST00000613051 740 ntBASIC15.51■□□□□ 0.07
PCDH17O14917 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
PCDH17O14917 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH17O14917 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH17O14917 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
PCDH17O14917 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH17O14917 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH17O14917 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH17O14917 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH17O14917 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH17O14917 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PCDH17O14917 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH17O14917 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDH17O14917 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH17O14917 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH17O14917 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH17O14917 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDH17O14917 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH17O14917 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH17O14917 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH17O14917 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH17O14917 AC092850.2-201ENST00000623821 2697 ntBASIC15.51■□□□□ 0.07
PCDH17O14917 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH17O14917 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH17O14917 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDH17O14917 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
PCDH17O14917 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PCDH17O14917 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
PCDH17O14917 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.5■□□□□ 0.07
PCDH17O14917 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDH17O14917 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH17O14917 AC069262.1-201ENST00000539058 672 ntBASIC15.5■□□□□ 0.07
PCDH17O14917 SPCS2P1-201ENST00000561636 679 ntBASIC15.5■□□□□ 0.07
PCDH17O14917 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
PCDH17O14917 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH17O14917 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDH17O14917 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDH17O14917 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDH17O14917 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH17O14917 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PCDH17O14917 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDH17O14917 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDH17O14917 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PCDH17O14917 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PCDH17O14917 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDH17O14917 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH17O14917 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH17O14917 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH17O14917 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDH17O14917 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH17O14917 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDH17O14917 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH17O14917 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH17O14917 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDH17O14917 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
PCDH17O14917 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH17O14917 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH17O14917 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH17O14917 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH17O14917 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
PCDH17O14917 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDH17O14917 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDH17O14917 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms