Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 AC011477.6-201ENST00000604980 1927 ntBASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 AC051619.7-201ENST00000568314 623 ntBASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHA4Q9UN74 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 MTND6P24-201ENST00000440466 518 ntBASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms