Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 AC069224.1-201ENST00000566372 1715 ntBASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 AC026992.2-203ENST00000563004 2419 ntBASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 CICP7-201ENST00000432723 2477 ntBASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 AP000593.1-201ENST00000393668 712 ntBASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 SLC25A1P3-201ENST00000395415 828 ntBASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 TP73-201ENST00000346387 4854 ntTSL 5 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 TMPRSS13-205ENST00000526090 2592 ntTSL 2 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 AC022497.1-201ENST00000624916 3691 ntBASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 NBN-203ENST00000409330 4523 ntTSL 5 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms