RNA–Protein interactions for RNA: ENST00000295055.12

CAPN13-201, Transcript of calpain 13, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN13, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-201ENST00000295055 NISCHQ9Y2I1 1504 aa26.19■■□□□ 1.78
CAPN13-201ENST00000295055 CCDC180Q9P1Z9 1646 aa22.94■■□□□ 1.26
CAPN13-201ENST00000295055 ABCC9O60706 1549 aa21.93■■□□□ 1.1
CAPN13-201ENST00000295055 ZCCHC6Q5VYS8 1495 aaKnown RBP21.93■■□□□ 1.1
CAPN13-201ENST00000295055 DCAF8L2P0C7V8 631 aa21.69■■□□□ 1.06
CAPN13-201ENST00000295055 DCAF1Q9Y4B6 1507 aa21.67■■□□□ 1.06
CAPN13-201ENST00000295055 PELP1Q8IZL8 1130 aaKnown RBP21.6■■□□□ 1.05
CAPN13-201ENST00000295055 MYO15BQ96JP2 1530 aa21.53■■□□□ 1.04
CAPN13-201ENST00000295055 NACADO15069 1562 aa21.46■■□□□ 1.03
CAPN13-201ENST00000295055 RB1CC1Q8TDY2 1594 aa21.32■■□□□ 1
CAPN13-201ENST00000295055 MYT1Q01538 1121 aa21.22■□□□□ 0.99
CAPN13-201ENST00000295055 SHROOM4Q9ULL8 1493 aa21.11■□□□□ 0.97
CAPN13-201ENST00000295055 SCRIBQ14160 1630 aa21.03■□□□□ 0.96
CAPN13-201ENST00000295055 UNC13AQ9UPW8 1703 aa20.85■□□□□ 0.93
CAPN13-201ENST00000295055 BICRAQ9NZM4 1560 aa20.69■□□□□ 0.9
CAPN13-201ENST00000295055 PABPN1Q86U42 306 aaKnown RBP eCLIP20.64■□□□□ 0.9
CAPN13-201ENST00000295055 TTBK1Q5TCY1 1321 aaPredicted RBP20.46■□□□□ 0.87
CAPN13-201ENST00000295055 PRKCSHP14314 528 aaPredicted RBP20.41■□□□□ 0.86
CAPN13-201ENST00000295055 CECR2Q9BXF3 1484 aa20.36■□□□□ 0.85
CAPN13-201ENST00000295055 BAZ1AQ9NRL2 1556 aaPredicted RBP20.23■□□□□ 0.83
CAPN13-201ENST00000295055 RSF1Q96T23 1441 aaPredicted RBP20.21■□□□□ 0.83
CAPN13-201ENST00000295055 MROH2BQ7Z745 1585 aa20.21■□□□□ 0.83
CAPN13-201ENST00000295055 SUPT5HO00267 1087 aaKnown RBP20.19■□□□□ 0.82
CAPN13-201ENST00000295055 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
CAPN13-201ENST00000295055 EIF4G1Q04637 1599 aaKnown RBP20.08■□□□□ 0.81
CAPN13-201ENST00000295055 WIZO95785 1651 aa20.01■□□□□ 0.79
CAPN13-201ENST00000295055 PEG3Q9GZU2 1588 aa19.96■□□□□ 0.79
CAPN13-201ENST00000295055 ATAD2BQ9ULI0 1458 aa19.93■□□□□ 0.78
CAPN13-201ENST00000295055 HRCP23327 699 aa19.91■□□□□ 0.78
CAPN13-201ENST00000295055 SMARCA2P51531 1590 aa19.9■□□□□ 0.78
CAPN13-201ENST00000295055 CC2D2AQ9P2K1 1620 aa19.85■□□□□ 0.77
CAPN13-201ENST00000295055 NCAPD3P42695 1498 aa19.82■□□□□ 0.76
CAPN13-201ENST00000295055 APLP2Q06481 763 aa19.81■□□□□ 0.76
CAPN13-201ENST00000295055 TOP2AP11388 1531 aaKnown RBP19.81■□□□□ 0.76
CAPN13-201ENST00000295055 SCAF1Q9H7N4 1312 aaKnown RBP19.8■□□□□ 0.76
CAPN13-201ENST00000295055 BAZ1BQ9UIG0 1483 aaKnown RBP19.78■□□□□ 0.76
CAPN13-201ENST00000295055 BCL11AQ9H165 835 aa19.78■□□□□ 0.76
CAPN13-201ENST00000295055 SLC24A1O60721 1099 aa19.75■□□□□ 0.75
CAPN13-201ENST00000295055 HMGXB3Q12766 1538 aa19.75■□□□□ 0.75
CAPN13-201ENST00000295055 ERICH6Q7L0X2 663 aa19.69■□□□□ 0.74
CAPN13-201ENST00000295055 DNAJC5BQ9UF47 199 aa19.64■□□□□ 0.73
CAPN13-201ENST00000295055 CCDC88BA6NC98 1476 aa19.62■□□□□ 0.73
CAPN13-201ENST00000295055 FAM9AQ8IZU1 332 aaPredicted RBP19.59■□□□□ 0.73
CAPN13-201ENST00000295055 PPARGC1BQ86YN6 1023 aaKnown RBP19.47■□□□□ 0.71
CAPN13-201ENST00000295055 CFTRP13569 1480 aa19.29■□□□□ 0.68
CAPN13-201ENST00000295055 CADPSQ9ULU8 1353 aa19.29■□□□□ 0.68
CAPN13-201ENST00000295055 CHIC1Q5VXU3 224 aa19.21■□□□□ 0.67
CAPN13-201ENST00000295055 NESP48681 1621 aa19.17■□□□□ 0.66
CAPN13-201ENST00000295055 LAMC3Q9Y6N6 1575 aa19.17■□□□□ 0.66
CAPN13-201ENST00000295055 PRDM2Q13029 1718 aa19.13■□□□□ 0.65
CAPN13-201ENST00000295055 ABCC8Q09428 1581 aa19.08■□□□□ 0.64
CAPN13-201ENST00000295055 FANCD2Q9BXW9 1451 aa19.05■□□□□ 0.64
CAPN13-201ENST00000295055 PDS5BQ9NTI5 1447 aa19.04■□□□□ 0.64
CAPN13-201ENST00000295055 TRIM41Q8WV44 630 aa19.03■□□□□ 0.64
CAPN13-201ENST00000295055 WRNQ14191 1432 aaPredicted RBP eCLIP19.02■□□□□ 0.63
CAPN13-201ENST00000295055 CEP164Q9UPV0 1460 aa18.95■□□□□ 0.62
CAPN13-201ENST00000295055 CENPBP07199 599 aaPredicted RBP18.93■□□□□ 0.62
CAPN13-201ENST00000295055 SYNJ1O43426 1573 aa18.93■□□□□ 0.62
CAPN13-201ENST00000295055 KIF21AQ7Z4S6 1674 aa18.92■□□□□ 0.62
CAPN13-201ENST00000295055 CUX1P39880 1505 aa18.91■□□□□ 0.62
CAPN13-201ENST00000295055 TOP2BQ02880 1626 aa18.89■□□□□ 0.62
CAPN13-201ENST00000295055 DAXXQ9UER7 740 aaPredicted RBP18.88■□□□□ 0.61
CAPN13-201ENST00000295055 BIVM-ERCC5R4GMW8 1640 aa18.87■□□□□ 0.61
CAPN13-201ENST00000295055 ERCC6Q03468 1493 aa18.83■□□□□ 0.61
CAPN13-201ENST00000295055 URB2Q14146 1524 aaKnown RBP18.83■□□□□ 0.6
CAPN13-201ENST00000295055 DNMBPQ6XZF7 1577 aa18.82■□□□□ 0.6
CAPN13-201ENST00000295055 TOPBP1Q92547 1522 aa18.81■□□□□ 0.6
CAPN13-201ENST00000295055 MRC2Q9UBG0 1479 aa18.8■□□□□ 0.6
CAPN13-201ENST00000295055 ACIN1Q9UKV3 1341 aaKnown RBP18.75■□□□□ 0.59
CAPN13-201ENST00000295055 FGD5Q6ZNL6 1462 aa18.74■□□□□ 0.59
CAPN13-201ENST00000295055 WDR62O43379 1518 aa18.71■□□□□ 0.59
CAPN13-201ENST00000295055 THOC2Q8NI27 1593 aaKnown RBP18.7■□□□□ 0.58
CAPN13-201ENST00000295055 POLA1P09884 1462 aaPredicted RBP18.7■□□□□ 0.58
CAPN13-201ENST00000295055 SOGA1O94964 1423 aa18.69■□□□□ 0.58
CAPN13-201ENST00000295055 GTF3C3Q9Y5Q9 886 aa18.67■□□□□ 0.58
CAPN13-201ENST00000295055 EIF5BO60841 1220 aaKnown RBP18.65■□□□□ 0.58
CAPN13-201ENST00000295055 NEUROD1Q13562 356 aa18.64■□□□□ 0.57
CAPN13-201ENST00000295055 PCGF6Q9BYE7 350 aa18.64■□□□□ 0.57
CAPN13-201ENST00000295055 RAD54L2Q9Y4B4 1467 aa18.64■□□□□ 0.57
CAPN13-201ENST00000295055 RUSC2Q8N2Y8 1516 aa18.63■□□□□ 0.57
CAPN13-201ENST00000295055 ANP32EQ9BTT0 268 aa18.61■□□□□ 0.57
CAPN13-201ENST00000295055 EEA1Q15075 1411 aa18.6■□□□□ 0.57
CAPN13-201ENST00000295055 CUX2O14529 1486 aa18.59■□□□□ 0.57
CAPN13-201ENST00000295055 ABCA10Q8WWZ4 1543 aa18.59■□□□□ 0.57
CAPN13-201ENST00000295055 KIF27Q86VH2 1401 aa18.56■□□□□ 0.56
CAPN13-201ENST00000295055 TARBP1Q13395 1621 aaKnown RBP18.55■□□□□ 0.56
CAPN13-201ENST00000295055 CSRNP3Q8WYN3 585 aa18.54■□□□□ 0.56
CAPN13-201ENST00000295055 IFT140Q96RY7 1462 aa18.53■□□□□ 0.56
CAPN13-201ENST00000295055 WDR97A6NE52 1622 aa18.52■□□□□ 0.56
CAPN13-201ENST00000295055 TDRD9Q8NDG6 1382 aaKnown RBP18.48■□□□□ 0.55
CAPN13-201ENST00000295055 PLEKHG5O94827 1062 aa18.46■□□□□ 0.55
CAPN13-201ENST00000295055 IGF1RP08069 1367 aa18.46■□□□□ 0.55
CAPN13-201ENST00000295055 LOC105371045A0A1W2PR82 267 aa18.46■□□□□ 0.54
CAPN13-201ENST00000295055 ABCA5Q8WWZ7 1642 aa18.44■□□□□ 0.54
CAPN13-201ENST00000295055 ZNF608Q9ULD9 1512 aaPredicted RBP18.43■□□□□ 0.54
CAPN13-201ENST00000295055 GAPVD1Q14C86 1478 aa18.43■□□□□ 0.54
CAPN13-201ENST00000295055 AQRO60306 1485 aaKnown RBP eCLIP18.42■□□□□ 0.54
CAPN13-201ENST00000295055 PRXQ9BXM0 1461 aa18.38■□□□□ 0.53
CAPN13-201ENST00000295055 ANO8Q9HCE9 1232 aaPredicted RBP18.38■□□□□ 0.53
CAPN13-201ENST00000295055 ERICH3Q5RHP9 1530 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms