Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 MROH4P-201ENST00000431302 1578 ntBASIC14.34□□□□□ -0.11
AP3S1Q92572 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
AP3S1Q92572 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.34□□□□□ -0.11
AP3S1Q92572 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.34□□□□□ -0.11
AP3S1Q92572 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
AP3S1Q92572 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
AP3S1Q92572 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
AP3S1Q92572 CICP4-201ENST00000447359 2812 ntBASIC14.33□□□□□ -0.11
AP3S1Q92572 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.33□□□□□ -0.11
AP3S1Q92572 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
AP3S1Q92572 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
AP3S1Q92572 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
AP3S1Q92572 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
AP3S1Q92572 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.33□□□□□ -0.12
AP3S1Q92572 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.33□□□□□ -0.12
AP3S1Q92572 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.33□□□□□ -0.12
AP3S1Q92572 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.33□□□□□ -0.12
AP3S1Q92572 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.33□□□□□ -0.12
AP3S1Q92572 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
AP3S1Q92572 LINC00982-205ENST00000420957 435 ntBASIC14.33□□□□□ -0.12
AP3S1Q92572 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.33□□□□□ -0.12
AP3S1Q92572 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.33□□□□□ -0.12
AP3S1Q92572 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.33□□□□□ -0.12
AP3S1Q92572 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
AP3S1Q92572 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.33□□□□□ -0.12
AP3S1Q92572 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.33□□□□□ -0.12
AP3S1Q92572 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.33□□□□□ -0.12
AP3S1Q92572 AC104581.4-201ENST00000623126 3052 ntBASIC14.33□□□□□ -0.12
AP3S1Q92572 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.33□□□□□ -0.12
AP3S1Q92572 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 AC008677.1-201ENST00000519230 1561 ntBASIC14.33□□□□□ -0.12
AP3S1Q92572 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
AP3S1Q92572 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S1Q92572 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S1Q92572 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
AP3S1Q92572 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S1Q92572 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
AP3S1Q92572 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.32□□□□□ -0.12
AP3S1Q92572 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.32□□□□□ -0.12
AP3S1Q92572 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S1Q92572 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.32□□□□□ -0.12
AP3S1Q92572 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
AP3S1Q92572 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S1Q92572 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S1Q92572 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S1Q92572 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S1Q92572 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S1Q92572 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S1Q92572 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
AP3S1Q92572 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
AP3S1Q92572 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
AP3S1Q92572 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
AP3S1Q92572 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.32□□□□□ -0.12
AP3S1Q92572 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S1Q92572 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S1Q92572 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
AP3S1Q92572 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.32□□□□□ -0.12
AP3S1Q92572 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S1Q92572 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S1Q92572 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S1Q92572 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S1Q92572 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S1Q92572 MIR718-201ENST00000390190 70 ntBASIC14.32□□□□□ -0.12
AP3S1Q92572 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S1Q92572 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
AP3S1Q92572 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S1Q92572 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.32□□□□□ -0.12
AP3S1Q92572 AC091167.2-201ENST00000579581 588 ntBASIC14.32□□□□□ -0.12
AP3S1Q92572 AC011467.2-201ENST00000598425 242 ntBASIC14.32□□□□□ -0.12
AP3S1Q92572 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
AP3S1Q92572 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S1Q92572 AC148477.5-201ENST00000625164 1645 ntBASIC14.32□□□□□ -0.12
AP3S1Q92572 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
AP3S1Q92572 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms