Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 AC008677.1-201ENST00000519230 1561 ntBASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 AP005117.1-201ENST00000584346 1413 ntBASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 LINC02228-204ENST00000642115 2962 ntBASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 AC006486.2-201ENST00000624246 2199 ntBASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 HCG4-201ENST00000418983 998 ntBASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 KRT18P56-201ENST00000507275 550 ntBASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 MIR5100-201ENST00000579544 119 ntBASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB3IL1Q8TBN0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms