Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PACS2Q86VP3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PACS2Q86VP3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
PACS2Q86VP3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PACS2Q86VP3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PACS2Q86VP3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PACS2Q86VP3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.41■□□□□ 0.22
PACS2Q86VP3 LINC02447-202ENST00000501888 2146 ntBASIC16.41■□□□□ 0.22
PACS2Q86VP3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.41■□□□□ 0.22
PACS2Q86VP3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.41■□□□□ 0.22
PACS2Q86VP3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.41■□□□□ 0.22
PACS2Q86VP3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PACS2Q86VP3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.41■□□□□ 0.22
PACS2Q86VP3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PACS2Q86VP3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.41■□□□□ 0.22
PACS2Q86VP3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PACS2Q86VP3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PACS2Q86VP3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PACS2Q86VP3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PACS2Q86VP3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.41■□□□□ 0.22
PACS2Q86VP3 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PACS2Q86VP3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PACS2Q86VP3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PACS2Q86VP3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PACS2Q86VP3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.4■□□□□ 0.22
PACS2Q86VP3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.4■□□□□ 0.22
PACS2Q86VP3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PACS2Q86VP3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PACS2Q86VP3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PACS2Q86VP3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PACS2Q86VP3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PACS2Q86VP3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PACS2Q86VP3 TMBIM7P-203ENST00000641617 1718 ntBASIC16.4■□□□□ 0.22
PACS2Q86VP3 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PACS2Q86VP3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.4■□□□□ 0.22
PACS2Q86VP3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.4■□□□□ 0.22
PACS2Q86VP3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.4■□□□□ 0.22
PACS2Q86VP3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PACS2Q86VP3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PACS2Q86VP3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PACS2Q86VP3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.4■□□□□ 0.22
PACS2Q86VP3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.4■□□□□ 0.22
PACS2Q86VP3 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC16.4■□□□□ 0.22
PACS2Q86VP3 AC112698.1-201ENST00000510299 916 ntBASIC16.4■□□□□ 0.22
PACS2Q86VP3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.4■□□□□ 0.22
PACS2Q86VP3 AC006518.1-201ENST00000541449 943 ntBASIC16.4■□□□□ 0.22
PACS2Q86VP3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.4■□□□□ 0.22
PACS2Q86VP3 AL353801.3-201ENST00000609898 542 ntBASIC16.4■□□□□ 0.22
PACS2Q86VP3 AL121772.3-201ENST00000610840 674 ntBASIC16.4■□□□□ 0.22
PACS2Q86VP3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
PACS2Q86VP3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PACS2Q86VP3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PACS2Q86VP3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.4■□□□□ 0.22
PACS2Q86VP3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PACS2Q86VP3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PACS2Q86VP3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
PACS2Q86VP3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PACS2Q86VP3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PACS2Q86VP3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PACS2Q86VP3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.4■□□□□ 0.22
PACS2Q86VP3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PACS2Q86VP3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PACS2Q86VP3 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PACS2Q86VP3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PACS2Q86VP3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PACS2Q86VP3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
PACS2Q86VP3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PACS2Q86VP3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PACS2Q86VP3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PACS2Q86VP3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PACS2Q86VP3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PACS2Q86VP3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.39■□□□□ 0.21
PACS2Q86VP3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PACS2Q86VP3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.39■□□□□ 0.21
PACS2Q86VP3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC16.39■□□□□ 0.21
PACS2Q86VP3 Z82170.1-201ENST00000625081 3192 ntBASIC16.39■□□□□ 0.21
PACS2Q86VP3 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PACS2Q86VP3 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PACS2Q86VP3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PACS2Q86VP3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PACS2Q86VP3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PACS2Q86VP3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.39■□□□□ 0.21
PACS2Q86VP3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PACS2Q86VP3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PACS2Q86VP3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PACS2Q86VP3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.39■□□□□ 0.21
PACS2Q86VP3 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
PACS2Q86VP3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PACS2Q86VP3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PACS2Q86VP3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PACS2Q86VP3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PACS2Q86VP3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PACS2Q86VP3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.39■□□□□ 0.21
PACS2Q86VP3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.39■□□□□ 0.21
PACS2Q86VP3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.39■□□□□ 0.21
PACS2Q86VP3 KRT126P-201ENST00000549467 1181 ntBASIC16.39■□□□□ 0.21
PACS2Q86VP3 EMC4-208ENST00000559078 599 ntTSL 3 BASIC16.39■□□□□ 0.21
PACS2Q86VP3 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC16.39■□□□□ 0.21
PACS2Q86VP3 LINC01711-201ENST00000598340 967 ntBASIC16.39■□□□□ 0.21
PACS2Q86VP3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms