Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-5P52952 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-5P52952 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
NKX2-5P52952 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-5P52952 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-5P52952 AL023775.1-201ENST00000454907 1746 ntBASIC13.81□□□□□ -0.2
NKX2-5P52952 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-5P52952 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-5P52952 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX2-5P52952 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-5P52952 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
NKX2-5P52952 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-5P52952 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-5P52952 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-5P52952 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-5P52952 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.8□□□□□ -0.2
NKX2-5P52952 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NKX2-5P52952 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NKX2-5P52952 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.8□□□□□ -0.2
NKX2-5P52952 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX2-5P52952 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX2-5P52952 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NKX2-5P52952 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NKX2-5P52952 PNMA6B-201ENST00000538162 1200 ntBASIC13.8□□□□□ -0.2
NKX2-5P52952 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX2-5P52952 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
NKX2-5P52952 AC010240.3-201ENST00000607688 395 ntBASIC13.8□□□□□ -0.2
NKX2-5P52952 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC13.8□□□□□ -0.2
NKX2-5P52952 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
NKX2-5P52952 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
NKX2-5P52952 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX2-5P52952 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NKX2-5P52952 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NKX2-5P52952 AC067750.1-201ENST00000608826 6545 ntBASIC13.8□□□□□ -0.2
NKX2-5P52952 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-5P52952 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NKX2-5P52952 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX2-5P52952 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
NKX2-5P52952 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-5P52952 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-5P52952 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
NKX2-5P52952 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX2-5P52952 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX2-5P52952 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX2-5P52952 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-5P52952 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-5P52952 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-5P52952 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NKX2-5P52952 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NKX2-5P52952 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX2-5P52952 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-5P52952 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-5P52952 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX2-5P52952 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-5P52952 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-5P52952 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX2-5P52952 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
NKX2-5P52952 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-5P52952 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.79□□□□□ -0.2
NKX2-5P52952 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
NKX2-5P52952 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX2-5P52952 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX2-5P52952 DUX4L17-201ENST00000557360 1267 ntBASIC13.79□□□□□ -0.2
NKX2-5P52952 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-5P52952 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.79□□□□□ -0.2
NKX2-5P52952 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.79□□□□□ -0.2
NKX2-5P52952 MAZ-216ENST00000616501 991 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX2-5P52952 AC231657.2-201ENST00000624556 255 ntBASIC13.79□□□□□ -0.2
NKX2-5P52952 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-5P52952 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-5P52952 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-5P52952 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-5P52952 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NKX2-5P52952 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-5P52952 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-5P52952 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-5P52952 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-5P52952 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX2-5P52952 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms