Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.39■□□□□ 0.69
CHGBP05060 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHGBP05060 AC112504.1-201ENST00000623415 1841 ntBASIC19.39■□□□□ 0.69
CHGBP05060 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
CHGBP05060 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CHGBP05060 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.39■□□□□ 0.69
CHGBP05060 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CHGBP05060 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.39■□□□□ 0.69
CHGBP05060 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CHGBP05060 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHGBP05060 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CHGBP05060 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHGBP05060 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.38■□□□□ 0.69
CHGBP05060 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHGBP05060 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHGBP05060 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHGBP05060 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHGBP05060 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHGBP05060 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHGBP05060 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHGBP05060 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHGBP05060 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.38■□□□□ 0.69
CHGBP05060 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHGBP05060 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHGBP05060 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CHGBP05060 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CHGBP05060 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHGBP05060 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.38■□□□□ 0.69
CHGBP05060 SPDYE17-201ENST00000412399 783 ntBASIC19.38■□□□□ 0.69
CHGBP05060 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.38■□□□□ 0.69
CHGBP05060 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.38■□□□□ 0.69
CHGBP05060 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.38■□□□□ 0.69
CHGBP05060 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.38■□□□□ 0.69
CHGBP05060 AL139010.1-201ENST00000454878 894 ntBASIC19.38■□□□□ 0.69
CHGBP05060 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.38■□□□□ 0.69
CHGBP05060 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.38■□□□□ 0.69
CHGBP05060 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.38■□□□□ 0.69
CHGBP05060 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.38■□□□□ 0.69
CHGBP05060 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.38■□□□□ 0.69
CHGBP05060 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CHGBP05060 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHGBP05060 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.38■□□□□ 0.69
CHGBP05060 CETN4P-206ENST00000642099 2168 ntBASIC19.38■□□□□ 0.69
CHGBP05060 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.38■□□□□ 0.69
CHGBP05060 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHGBP05060 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHGBP05060 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.37■□□□□ 0.69
CHGBP05060 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.37■□□□□ 0.69
CHGBP05060 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.37■□□□□ 0.69
CHGBP05060 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 HYMAI-201ENST00000635591 3347 ntBASIC19.37■□□□□ 0.69
CHGBP05060 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CHGBP05060 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CHGBP05060 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.37■□□□□ 0.69
CHGBP05060 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.37■□□□□ 0.69
CHGBP05060 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CHGBP05060 AZGP1P1-201ENST00000411909 902 ntBASIC19.37■□□□□ 0.69
CHGBP05060 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.37■□□□□ 0.69
CHGBP05060 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.37■□□□□ 0.69
CHGBP05060 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.37■□□□□ 0.69
CHGBP05060 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.37■□□□□ 0.69
CHGBP05060 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.37■□□□□ 0.69
CHGBP05060 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.37■□□□□ 0.69
CHGBP05060 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.37■□□□□ 0.69
CHGBP05060 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.37■□□□□ 0.69
CHGBP05060 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.37■□□□□ 0.69
CHGBP05060 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.37■□□□□ 0.69
CHGBP05060 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.37■□□□□ 0.69
CHGBP05060 AC008738.7-201ENST00000609744 511 ntBASIC19.37■□□□□ 0.69
CHGBP05060 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.37■□□□□ 0.69
CHGBP05060 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHGBP05060 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.37■□□□□ 0.69
CHGBP05060 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 PRAL-201ENST00000624952 3286 ntBASIC19.37■□□□□ 0.69
CHGBP05060 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHGBP05060 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHGBP05060 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.36■□□□□ 0.69
CHGBP05060 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHGBP05060 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CHGBP05060 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.36■□□□□ 0.69
CHGBP05060 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms