Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC27.11■■□□□ 1.93
PTCH2Q9Y6C5 AC024257.2-201ENST00000549699 147 ntBASIC27.11■■□□□ 1.93
PTCH2Q9Y6C5 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PTCH2Q9Y6C5 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PTCH2Q9Y6C5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
PTCH2Q9Y6C5 AL449106.1-201ENST00000608517 1980 ntBASIC27.1■■□□□ 1.93
PTCH2Q9Y6C5 MIR6821-201ENST00000617625 74 ntBASIC27.1■■□□□ 1.93
PTCH2Q9Y6C5 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.1■■□□□ 1.93
PTCH2Q9Y6C5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PTCH2Q9Y6C5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PTCH2Q9Y6C5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PTCH2Q9Y6C5 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PTCH2Q9Y6C5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PTCH2Q9Y6C5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PTCH2Q9Y6C5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PTCH2Q9Y6C5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PTCH2Q9Y6C5 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
PTCH2Q9Y6C5 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PTCH2Q9Y6C5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PTCH2Q9Y6C5 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
PTCH2Q9Y6C5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PTCH2Q9Y6C5 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.07■■□□□ 1.92
PTCH2Q9Y6C5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PTCH2Q9Y6C5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.06■■□□□ 1.92
PTCH2Q9Y6C5 AF131216.4-201ENST00000638924 1588 ntBASIC27.05■■□□□ 1.92
PTCH2Q9Y6C5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PTCH2Q9Y6C5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC27.05■■□□□ 1.92
PTCH2Q9Y6C5 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
PTCH2Q9Y6C5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
PTCH2Q9Y6C5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PTCH2Q9Y6C5 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PTCH2Q9Y6C5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC27.04■■□□□ 1.92
PTCH2Q9Y6C5 AL162430.1-201ENST00000480705 870 ntBASIC27.04■■□□□ 1.92
PTCH2Q9Y6C5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PTCH2Q9Y6C5 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC27.04■■□□□ 1.92
PTCH2Q9Y6C5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC27.04■■□□□ 1.92
PTCH2Q9Y6C5 AL136967.2-201ENST00000623968 743 ntBASIC27.04■■□□□ 1.92
PTCH2Q9Y6C5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC27.04■■□□□ 1.92
PTCH2Q9Y6C5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC27.04■■□□□ 1.92
PTCH2Q9Y6C5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PTCH2Q9Y6C5 AC097381.1-201ENST00000429019 1296 ntBASIC27.03■■□□□ 1.92
PTCH2Q9Y6C5 AF213884.3-201ENST00000563833 479 ntBASIC27.03■■□□□ 1.92
PTCH2Q9Y6C5 AC087623.3-201ENST00000607047 1098 ntBASIC27.03■■□□□ 1.92
PTCH2Q9Y6C5 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
PTCH2Q9Y6C5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PTCH2Q9Y6C5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PTCH2Q9Y6C5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PTCH2Q9Y6C5 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PTCH2Q9Y6C5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC27.01■■□□□ 1.91
PTCH2Q9Y6C5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PTCH2Q9Y6C5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
PTCH2Q9Y6C5 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
PTCH2Q9Y6C5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC27.01■■□□□ 1.91
PTCH2Q9Y6C5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC27.01■■□□□ 1.91
PTCH2Q9Y6C5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC27.01■■□□□ 1.91
PTCH2Q9Y6C5 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
PTCH2Q9Y6C5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27■■□□□ 1.91
PTCH2Q9Y6C5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PTCH2Q9Y6C5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
PTCH2Q9Y6C5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC27■■□□□ 1.91
PTCH2Q9Y6C5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC27■■□□□ 1.91
PTCH2Q9Y6C5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC27■■□□□ 1.91
PTCH2Q9Y6C5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC27■■□□□ 1.91
PTCH2Q9Y6C5 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27■■□□□ 1.91
PTCH2Q9Y6C5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
PTCH2Q9Y6C5 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PTCH2Q9Y6C5 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.99■■□□□ 1.91
PTCH2Q9Y6C5 BX255925.1-201ENST00000566954 1854 ntBASIC26.99■■□□□ 1.91
PTCH2Q9Y6C5 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PTCH2Q9Y6C5 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PTCH2Q9Y6C5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PTCH2Q9Y6C5 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.98■■□□□ 1.91
PTCH2Q9Y6C5 SRD5A1P1-201ENST00000442297 786 ntBASIC26.98■■□□□ 1.91
PTCH2Q9Y6C5 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PTCH2Q9Y6C5 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PTCH2Q9Y6C5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.98■■□□□ 1.91
PTCH2Q9Y6C5 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PTCH2Q9Y6C5 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PTCH2Q9Y6C5 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
PTCH2Q9Y6C5 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.97■■□□□ 1.91
PTCH2Q9Y6C5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PTCH2Q9Y6C5 PLD4-205ENST00000553861 667 ntTSL 2 BASIC26.97■■□□□ 1.91
PTCH2Q9Y6C5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PTCH2Q9Y6C5 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.97■■□□□ 1.91
PTCH2Q9Y6C5 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.96■■□□□ 1.91
PTCH2Q9Y6C5 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
PTCH2Q9Y6C5 MIR939-201ENST00000401314 82 ntBASIC26.96■■□□□ 1.91
PTCH2Q9Y6C5 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
PTCH2Q9Y6C5 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.95■■□□□ 1.91
PTCH2Q9Y6C5 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
PTCH2Q9Y6C5 AP001330.3-201ENST00000520123 633 ntBASIC26.94■■□□□ 1.9
PTCH2Q9Y6C5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
PTCH2Q9Y6C5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
PTCH2Q9Y6C5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.93■■□□□ 1.9
PTCH2Q9Y6C5 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PTCH2Q9Y6C5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PTCH2Q9Y6C5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PTCH2Q9Y6C5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.92■■□□□ 1.9
PTCH2Q9Y6C5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PTCH2Q9Y6C5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms