Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.64■□□□□ 0.89
DNAAF1Q8NEP3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DNAAF1Q8NEP3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DNAAF1Q8NEP3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.63■□□□□ 0.89
DNAAF1Q8NEP3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.63■□□□□ 0.89
DNAAF1Q8NEP3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.63■□□□□ 0.89
DNAAF1Q8NEP3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DNAAF1Q8NEP3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.63■□□□□ 0.89
DNAAF1Q8NEP3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DNAAF1Q8NEP3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
DNAAF1Q8NEP3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
DNAAF1Q8NEP3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
DNAAF1Q8NEP3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DNAAF1Q8NEP3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
DNAAF1Q8NEP3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.62■□□□□ 0.89
DNAAF1Q8NEP3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DNAAF1Q8NEP3 MIR7108-201ENST00000614319 87 ntBASIC20.62■□□□□ 0.89
DNAAF1Q8NEP3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DNAAF1Q8NEP3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
DNAAF1Q8NEP3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DNAAF1Q8NEP3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DNAAF1Q8NEP3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DNAAF1Q8NEP3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.61■□□□□ 0.89
DNAAF1Q8NEP3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DNAAF1Q8NEP3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DNAAF1Q8NEP3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.61■□□□□ 0.89
DNAAF1Q8NEP3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
DNAAF1Q8NEP3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
DNAAF1Q8NEP3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
DNAAF1Q8NEP3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DNAAF1Q8NEP3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
DNAAF1Q8NEP3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.6■□□□□ 0.89
DNAAF1Q8NEP3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
DNAAF1Q8NEP3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DNAAF1Q8NEP3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DNAAF1Q8NEP3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
DNAAF1Q8NEP3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DNAAF1Q8NEP3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.6■□□□□ 0.89
DNAAF1Q8NEP3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DNAAF1Q8NEP3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DNAAF1Q8NEP3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
DNAAF1Q8NEP3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
DNAAF1Q8NEP3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
DNAAF1Q8NEP3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DNAAF1Q8NEP3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DNAAF1Q8NEP3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DNAAF1Q8NEP3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.6■□□□□ 0.89
DNAAF1Q8NEP3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DNAAF1Q8NEP3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
DNAAF1Q8NEP3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
DNAAF1Q8NEP3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DNAAF1Q8NEP3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.59■□□□□ 0.89
DNAAF1Q8NEP3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.59■□□□□ 0.89
DNAAF1Q8NEP3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.59■□□□□ 0.89
DNAAF1Q8NEP3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DNAAF1Q8NEP3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DNAAF1Q8NEP3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
DNAAF1Q8NEP3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DNAAF1Q8NEP3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DNAAF1Q8NEP3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DNAAF1Q8NEP3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.58■□□□□ 0.89
DNAAF1Q8NEP3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DNAAF1Q8NEP3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.58■□□□□ 0.89
DNAAF1Q8NEP3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DNAAF1Q8NEP3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
DNAAF1Q8NEP3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DNAAF1Q8NEP3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DNAAF1Q8NEP3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.88
DNAAF1Q8NEP3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
DNAAF1Q8NEP3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
DNAAF1Q8NEP3 MIR639-201ENST00000384974 98 ntBASIC20.57■□□□□ 0.88
DNAAF1Q8NEP3 AL157400.5-201ENST00000507624 621 ntBASIC20.57■□□□□ 0.88
DNAAF1Q8NEP3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DNAAF1Q8NEP3 AC025884.2-201ENST00000553429 711 ntBASIC20.57■□□□□ 0.88
DNAAF1Q8NEP3 AC060814.1-201ENST00000554326 538 ntBASIC20.57■□□□□ 0.88
DNAAF1Q8NEP3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DNAAF1Q8NEP3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DNAAF1Q8NEP3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DNAAF1Q8NEP3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DNAAF1Q8NEP3 LINC00543-201ENST00000567234 1845 ntBASIC20.56■□□□□ 0.88
DNAAF1Q8NEP3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DNAAF1Q8NEP3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DNAAF1Q8NEP3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DNAAF1Q8NEP3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DNAAF1Q8NEP3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DNAAF1Q8NEP3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
DNAAF1Q8NEP3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DNAAF1Q8NEP3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DNAAF1Q8NEP3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
DNAAF1Q8NEP3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DNAAF1Q8NEP3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DNAAF1Q8NEP3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DNAAF1Q8NEP3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.55■□□□□ 0.88
DNAAF1Q8NEP3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.55■□□□□ 0.88
DNAAF1Q8NEP3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DNAAF1Q8NEP3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.55■□□□□ 0.88
DNAAF1Q8NEP3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DNAAF1Q8NEP3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DNAAF1Q8NEP3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DNAAF1Q8NEP3 MIR3960-201ENST00000583311 91 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms