Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 ZMYM3-201ENST00000314425 5536 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.056e-6■■■■□ 21.1
PABPN1Q86U42 ARIH2-207ENST00000452385 2778 ntTSL 214.48□□□□□ -0.096e-6■■■■□ 21.1
PABPN1Q86U42 RTFDC1-206ENST00000477485 464 ntTSL 314.28□□□□□ -0.126e-6■■■■□ 21.1
PABPN1Q86U42 ZMYM3-205ENST00000373984 5253 ntTSL 5 BASIC13.74□□□□□ -0.216e-6■■■■□ 21.1
PABPN1Q86U42 ATP6AP1L-204ENST00000508366 3524 ntTSL 213.62□□□□□ -0.236e-6■■■■□ 21.1
PABPN1Q86U42 NDUFS2-213ENST00000493849 910 ntTSL 313.09□□□□□ -0.316e-6■■■■□ 21.1
PABPN1Q86U42 NDUFS2-212ENST00000492153 426 ntTSL 212.9□□□□□ -0.346e-6■■■■□ 21.1
PABPN1Q86U42 SPPL2B-205ENST00000589515 1733 ntTSL 537.56■■■■□ 3.62e-6■■■■□ 21
PABPN1Q86U42 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.822e-6■■■■□ 21
PABPN1Q86U42 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.82e-6■■■■□ 21
PABPN1Q86U42 DDX41-216ENST00000513562 552 ntTSL 423.97■■□□□ 1.431e-6■■■■□ 21
PABPN1Q86U42 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.546e-7■■■■□ 21
PABPN1Q86U42 RNF31-223ENST00000560754 606 ntTSL 328.6■■■□□ 2.173e-7■■■■□ 20.9
PABPN1Q86U42 ACY1-219ENST00000637102 1488 ntTSL 328.11■■■□□ 2.092e-7■■■■□ 20.9
PABPN1Q86U42 HNF4A-201ENST00000316099 6445 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.325e-6■■■■□ 20.9
PABPN1Q86U42 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC16.06■□□□□ 0.165e-6■■■■□ 20.9
PABPN1Q86U42 UBR4-213ENST00000483922 543 ntTSL 527.99■■■□□ 2.071e-7■■■■□ 20.9
PABPN1Q86U42 DDX56-212ENST00000485367 1781 ntTSL 521.48■■□□□ 1.036e-7■■■■□ 20.9
PABPN1Q86U42 ABCC6-205ENST00000576204 1914 ntTSL 529.47■■■□□ 2.311e-6■■■■□ 20.9
PABPN1Q86U42 MSH5-218ENST00000494646 528 ntTSL 419.72■□□□□ 0.752e-9■■■■□ 20.9
PABPN1Q86U42 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC28.11■■■□□ 2.091e-7■■■■□ 20.9
PABPN1Q86U42 LMBR1L-202ENST00000417750 2334 ntTSL 225.91■■□□□ 1.741e-7■■■■□ 20.9
PABPN1Q86U42 LMBR1L-216ENST00000550867 2800 ntTSL 1 (best)23.47■■□□□ 1.351e-7■■■■□ 20.9
PABPN1Q86U42 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.131e-7■■■■□ 20.9
PABPN1Q86U42 LMBR1L-227ENST00000552577 2083 ntTSL 219.47■□□□□ 0.711e-7■■■■□ 20.9
PABPN1Q86U42 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC23.6■■□□□ 1.376e-8■■■■□ 20.9
PABPN1Q86U42 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.076e-8■■■■□ 20.9
PABPN1Q86U42 ANO9-208ENST00000534161 2158 ntTSL 229.03■■■□□ 2.241e-7■■■■□ 20.9
PABPN1Q86U42 ANO9-207ENST00000532094 5487 ntTSL 225.96■■□□□ 1.751e-7■■■■□ 20.9
PABPN1Q86U42 ANO9-206ENST00000528927 2639 ntTSL 1 (best)25.2■■□□□ 1.621e-7■■■■□ 20.9
PABPN1Q86U42 ANO9-205ENST00000526142 2868 ntTSL 223.68■■□□□ 1.381e-7■■■■□ 20.9
PABPN1Q86U42 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.091e-7■■■■□ 20.9
PABPN1Q86U42 CHRD-215ENST00000485883 568 ntTSL 442.79■■■■■ 4.442e-7■■■■□ 20.9
PABPN1Q86U42 ENTPD6-212ENST00000439162 1028 ntAPPRIS ALT2 TSL 350.46■■■■■ 5.674e-7■■■■□ 20.8
PABPN1Q86U42 ENTPD6-205ENST00000417467 809 ntTSL 549.54■■■■■ 5.524e-7■■■■□ 20.8
PABPN1Q86U42 ENTPD6-208ENST00000427553 451 ntTSL 330.98■■■□□ 2.554e-7■■■■□ 20.8
PABPN1Q86U42 COL18A1-206ENST00000459895 588 ntTSL 324.96■■□□□ 1.594e-12■■■■□ 20.8
PABPN1Q86U42 IPO4-205ENST00000558233 1015 ntTSL 531.29■■■□□ 2.61e-6■■■■□ 20.8
PABPN1Q86U42 COL27A1-204ENST00000477421 3991 ntTSL 217■□□□□ 0.314e-11■■■■□ 20.8
PABPN1Q86U42 COL16A1-206ENST00000461217 852 ntTSL 331.45■■■□□ 2.633e-6■■■■□ 20.8
PABPN1Q86U42 PDE3A-202ENST00000542675 685 ntTSL 325.62■■□□□ 1.695e-15■■■■□ 20.8
PABPN1Q86U42 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 15e-15■■■■□ 20.8
PABPN1Q86U42 MST1-207ENST00000481930 565 ntTSL 529.27■■■□□ 2.282e-14■■■■□ 20.7
PABPN1Q86U42 NT5DC2-206ENST00000466112 887 ntTSL 233.71■■■□□ 2.991e-6■■■■□ 20.7
PABPN1Q86U42 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC28.67■■■□□ 2.181e-6■■■■□ 20.7
PABPN1Q86U42 GOLGA2-214ENST00000611957 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.431e-6■■■■□ 20.7
PABPN1Q86U42 GOLGA2-201ENST00000421699 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.231e-6■■■■□ 20.7
PABPN1Q86U42 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC31.03■■■□□ 2.562e-6■■■■□ 20.7
PABPN1Q86U42 DDX56-206ENST00000446987 1853 ntTSL 524.03■■□□□ 1.445e-7■■■■□ 20.7
PABPN1Q86U42 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.385e-7■■■■□ 20.7
PABPN1Q86U42 DDX56-203ENST00000421223 3028 ntTSL 217.96■□□□□ 0.465e-7■■■■□ 20.7
PABPN1Q86U42 SLC22A31-203ENST00000563595 780 ntTSL 350.56■■■■■ 5.681e-7■■■■□ 20.6
PABPN1Q86U42 PIEZO1-214ENST00000521877 686 ntTSL 236.17■■■■□ 3.382e-6■■■■□ 20.6
PABPN1Q86U42 PIEZO1-213ENST00000518793 660 ntTSL 325.35■■□□□ 1.652e-6■■■■□ 20.6
PABPN1Q86U42 PAN2-209ENST00000548043 4641 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.258e-11■■■■□ 20.6
PABPN1Q86U42 PAN2-205ENST00000547226 2642 ntTSL 515.38■□□□□ 0.058e-11■■■■□ 20.6
PABPN1Q86U42 PAN2-201ENST00000257931 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.028e-11■■■■□ 20.6
PABPN1Q86U42 PAN2-203ENST00000440411 4576 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.048e-11■■■■□ 20.6
PABPN1Q86U42 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.238e-11■■■■□ 20.6
PABPN1Q86U42 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.358e-11■■■■□ 20.6
PABPN1Q86U42 PAN2-217ENST00000551359 4685 ntTSL 510.4□□□□□ -0.748e-11■■■■□ 20.6
PABPN1Q86U42 AP3D1-207ENST00000589369 618 ntTSL 335.54■■■■□ 3.282e-10■■■■□ 20.6
PABPN1Q86U42 SFI1-227ENST00000495107 735 ntTSL 328.68■■■□□ 2.182e-10■■■■□ 20.6
PABPN1Q86U42 SARS2-206ENST00000594259 690 ntTSL 228.16■■■□□ 2.11e-6■■■■□ 20.6
PABPN1Q86U42 RHBG-209ENST00000622297 720 ntTSL 529.04■■■□□ 2.248e-8■■■■□ 20.6
PABPN1Q86U42 MAN2C1-235ENST00000567163 1356 ntTSL 542.78■■■■■ 4.445e-7■■■■□ 20.5
PABPN1Q86U42 IPO4-220ENST00000561462 1864 ntTSL 229.57■■■□□ 2.321e-6■■■■□ 20.5
PABPN1Q86U42 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.293e-7■■■■□ 20.5
PABPN1Q86U42 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC42.79■■■■■ 4.442e-9■■■■□ 20.5
PABPN1Q86U42 ANKRD13D-208ENST00000507915 1165 ntTSL 338.24■■■■□ 3.712e-9■■■■□ 20.5
PABPN1Q86U42 ANKRD13D-210ENST00000508422 477 ntTSL 236.83■■■■□ 3.492e-9■■■■□ 20.5
PABPN1Q86U42 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC35.08■■■■□ 3.212e-9■■■■□ 20.5
PABPN1Q86U42 ANKRD13D-204ENST00000504236 580 ntTSL 335.08■■■■□ 3.212e-9■■■■□ 20.5
PABPN1Q86U42 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC34.73■■■■□ 3.152e-9■■■■□ 20.5
PABPN1Q86U42 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC33.01■■■□□ 2.872e-9■■■■□ 20.5
PABPN1Q86U42 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC30.99■■■□□ 2.552e-9■■■■□ 20.5
PABPN1Q86U42 ANKRD13D-215ENST00000513750 2081 ntTSL 229.62■■■□□ 2.332e-9■■■■□ 20.5
PABPN1Q86U42 ANKRD13D-209ENST00000508417 2009 ntTSL 229.34■■■□□ 2.292e-9■■■■□ 20.5
PABPN1Q86U42 ANKRD13D-213ENST00000512231 2768 ntTSL 222.62■■□□□ 1.212e-9■■■■□ 20.5
PABPN1Q86U42 KNTC1-215ENST00000546125 624 ntTSL 57.89□□□□□ -1.152e-7■■■■□ 20.5
PABPN1Q86U42 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC27.37■■□□□ 1.971e-6■■■■□ 20.5
PABPN1Q86U42 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC26.27■■□□□ 1.81e-6■■■■□ 20.5
PABPN1Q86U42 MCM7-209ENST00000485286 2900 ntTSL 225.61■■□□□ 1.691e-6■■■■□ 20.5
PABPN1Q86U42 MCM7-201ENST00000303887 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.591e-6■■■■□ 20.5
PABPN1Q86U42 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC18.41■□□□□ 0.541e-6■■■■□ 20.5
PABPN1Q86U42 MCM7-210ENST00000489841 2515 ntTSL 1 (best)15.34■□□□□ 0.051e-6■■■■□ 20.5
PABPN1Q86U42 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC35.18■■■■□ 3.226e-8■■■■□ 20.4
PABPN1Q86U42 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC31.53■■■□□ 2.646e-8■■■■□ 20.4
PABPN1Q86U42 DBN1-206ENST00000472831 2667 ntTSL 226.36■■□□□ 1.816e-8■■■■□ 20.4
PABPN1Q86U42 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.616e-8■■■■□ 20.4
PABPN1Q86U42 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.796e-8■■■■□ 20.4
PABPN1Q86U42 KNTC1-210ENST00000539013 615 ntTSL 511.71□□□□□ -0.532e-7■■■■□ 20.4
PABPN1Q86U42 ACADVL-222ENST00000579894 429 ntTSL 228.41■■■□□ 2.142e-15■■■■□ 20.4
PABPN1Q86U42 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.122e-6■■■■□ 20.4
PABPN1Q86U42 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC30.96■■■□□ 2.552e-6■■■■□ 20.4
PABPN1Q86U42 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC29.65■■■□□ 2.342e-6■■■■□ 20.4
PABPN1Q86U42 ATAD3A-201ENST00000339113 2330 ntTSL 229.56■■■□□ 2.322e-6■■■■□ 20.4
PABPN1Q86U42 HARS-203ENST00000431330 1774 ntTSL 2 BASIC32.58■■■□□ 2.817e-7■■■■□ 20.3
PABPN1Q86U42 HARS-201ENST00000307633 1780 ntTSL 2 BASIC32.42■■■□□ 2.787e-7■■■■□ 20.3
PABPN1Q86U42 HARS-204ENST00000438307 1789 ntTSL 2 BASIC31.4■■■□□ 2.627e-7■■■■□ 20.3
Retrieved 100 of 8,254 protein–RNA pairs in 233.9 ms