RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, humanhuman

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31-223ENST00000560754 NISCHQ9Y2I1 1504 aa34.28■■■■□ 3.08
RNF31-223ENST00000560754 CCDC180Q9P1Z9 1646 aa30.73■■■□□ 2.51
RNF31-223ENST00000560754 ABCC9O60706 1549 aa30.68■■■□□ 2.5
RNF31-223ENST00000560754 RB1CC1Q8TDY2 1594 aa29.24■■■□□ 2.27
RNF31-223ENST00000560754 NACADO15069 1562 aa29.08■■■□□ 2.25
RNF31-223ENST00000560754 DCAF8L2P0C7V8 631 aa28.9■■■□□ 2.22
RNF31-223ENST00000560754 DNAJC5BQ9UF47 199 aa28.9■■■□□ 2.22
RNF31-223ENST00000560754 MYO15BQ96JP2 1530 aa28.73■■■□□ 2.19
RNF31-223ENST00000560754 UNC13AQ9UPW8 1703 aa28.62■■■□□ 2.17
RNF31-223ENST00000560754 PABPN1Q86U42 306 aaKnown RBP eCLIP28.6■■■□□ 2.173e-7■■■■□ 20.9
RNF31-223ENST00000560754 BICRAQ9NZM4 1560 aa28.43■■■□□ 2.14
RNF31-223ENST00000560754 ZCCHC6Q5VYS8 1495 aaKnown RBP28.36■■■□□ 2.13
RNF31-223ENST00000560754 DCAF1Q9Y4B6 1507 aa28.34■■■□□ 2.13
RNF31-223ENST00000560754 SHROOM4Q9ULL8 1493 aa28.02■■■□□ 2.08
RNF31-223ENST00000560754 SCRIBQ14160 1630 aa27.92■■■□□ 2.06
RNF31-223ENST00000560754 CC2D2AQ9P2K1 1620 aa27.74■■■□□ 2.03
RNF31-223ENST00000560754 EIF4G1Q04637 1599 aaKnown RBP27.69■■■□□ 2.02
RNF31-223ENST00000560754 CECR2Q9BXF3 1484 aa27.65■■■□□ 2.02
RNF31-223ENST00000560754 NCAPD3P42695 1498 aa26.88■■□□□ 1.89
RNF31-223ENST00000560754 ATAD2BQ9ULI0 1458 aa26.75■■□□□ 1.87
RNF31-223ENST00000560754 SMARCA4P51532 1647 aa26.7■■□□□ 1.86
RNF31-223ENST00000560754 SMARCA2P51531 1590 aa26.67■■□□□ 1.86
RNF31-223ENST00000560754 HMGXB3Q12766 1538 aa26.61■■□□□ 1.85
RNF31-223ENST00000560754 BAZ1AQ9NRL2 1556 aaPredicted RBP26.58■■□□□ 1.85
RNF31-223ENST00000560754 DNAJC5Q9H3Z4 198 aa26.55■■□□□ 1.84
RNF31-223ENST00000560754 PEG3Q9GZU2 1588 aa26.5■■□□□ 1.83
RNF31-223ENST00000560754 CUX2O14529 1486 aa26.47■■□□□ 1.83
RNF31-223ENST00000560754 ERCC6Q03468 1493 aa26.45■■□□□ 1.82
RNF31-223ENST00000560754 BAZ1BQ9UIG0 1483 aaKnown RBP26.44■■□□□ 1.82
RNF31-223ENST00000560754 MROH2BQ7Z745 1585 aa26.39■■□□□ 1.82
RNF31-223ENST00000560754 NESP48681 1621 aa26.38■■□□□ 1.81
RNF31-223ENST00000560754 LAMC3Q9Y6N6 1575 aa26.22■■□□□ 1.79
RNF31-223ENST00000560754 THOC2Q8NI27 1593 aaKnown RBP26.09■■□□□ 1.77
RNF31-223ENST00000560754 PDS5BQ9NTI5 1447 aa26.07■■□□□ 1.76
RNF31-223ENST00000560754 WIZO95785 1651 aa26.07■■□□□ 1.76
RNF31-223ENST00000560754 KIF21AQ7Z4S6 1674 aa26.04■■□□□ 1.76
RNF31-223ENST00000560754 CADPSQ9ULU8 1353 aa26.04■■□□□ 1.76
RNF31-223ENST00000560754 RSF1Q96T23 1441 aaPredicted RBP25.88■■□□□ 1.73
RNF31-223ENST00000560754 MRC2Q9UBG0 1479 aa25.8■■□□□ 1.72
RNF31-223ENST00000560754 WDR62O43379 1518 aa25.76■■□□□ 1.71
RNF31-223ENST00000560754 CFTRP13569 1480 aa25.74■■□□□ 1.71
RNF31-223ENST00000560754 TOP2AP11388 1531 aaKnown RBP25.71■■□□□ 1.71
RNF31-223ENST00000560754 FANCD2Q9BXW9 1451 aa25.69■■□□□ 1.7
RNF31-223ENST00000560754 CEP164Q9UPV0 1460 aa25.69■■□□□ 1.7
RNF31-223ENST00000560754 URB2Q14146 1524 aaKnown RBP25.49■■□□□ 1.67
RNF31-223ENST00000560754 CCDC88BA6NC98 1476 aa25.47■■□□□ 1.67
RNF31-223ENST00000560754 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
RNF31-223ENST00000560754 OSCARQ8IYS5 282 aa25.34■■□□□ 1.65
RNF31-223ENST00000560754 TRIM41Q8WV44 630 aa25.24■■□□□ 1.63
RNF31-223ENST00000560754 ABCC8Q09428 1581 aa25.22■■□□□ 1.63
RNF31-223ENST00000560754 TOPBP1Q92547 1522 aa25.22■■□□□ 1.63
RNF31-223ENST00000560754 IFT140Q96RY7 1462 aa25.21■■□□□ 1.63
RNF31-223ENST00000560754 ZNF608Q9ULD9 1512 aaPredicted RBP25.17■■□□□ 1.62
RNF31-223ENST00000560754 DNMBPQ6XZF7 1577 aa25.11■■□□□ 1.61
RNF31-223ENST00000560754 TARBP1Q13395 1621 aaKnown RBP25.02■■□□□ 1.6
RNF31-223ENST00000560754 EIF4G3O43432 1585 aaKnown RBP24.98■■□□□ 1.59
RNF31-223ENST00000560754 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.59
RNF31-223ENST00000560754 POLA1P09884 1462 aaPredicted RBP24.95■■□□□ 1.58
RNF31-223ENST00000560754 RIMBP3CA6NJZ7 1639 aa24.92■■□□□ 1.58
RNF31-223ENST00000560754 RIMBP3BA6NNM3 1639 aa24.92■■□□□ 1.58
RNF31-223ENST00000560754 RIMBP3Q9UFD9 1639 aa24.92■■□□□ 1.58
RNF31-223ENST00000560754 SOGA1O94964 1423 aa24.87■■□□□ 1.57
RNF31-223ENST00000560754 RAD54L2Q9Y4B4 1467 aa24.86■■□□□ 1.57
RNF31-223ENST00000560754 ARHGEF11O15085 1522 aa24.84■■□□□ 1.57
RNF31-223ENST00000560754 CHD1O14646 1710 aa24.83■■□□□ 1.57
RNF31-223ENST00000560754 TDRD9Q8NDG6 1382 aaKnown RBP24.81■■□□□ 1.56
RNF31-223ENST00000560754 FGD5Q6ZNL6 1462 aa24.78■■□□□ 1.56
RNF31-223ENST00000560754 CUX1P39880 1505 aa24.78■■□□□ 1.56
RNF31-223ENST00000560754 FBLN2P98095 1184 aa24.77■■□□□ 1.56
RNF31-223ENST00000560754 WDR97A6NE52 1622 aa24.75■■□□□ 1.55
RNF31-223ENST00000560754 CYB5RLQ6IPT4 315 aa24.71■■□□□ 1.55
RNF31-223ENST00000560754 SUPT5HO00267 1087 aaKnown RBP24.69■■□□□ 1.54
RNF31-223ENST00000560754 SNAPC4Q5SXM2 1469 aa24.64■■□□□ 1.54
RNF31-223ENST00000560754 CHMP7Q8WUX9 453 aaPredicted RBP24.63■■□□□ 1.53
RNF31-223ENST00000560754 GRIN2BQ13224 1484 aa24.63■■□□□ 1.53
RNF31-223ENST00000560754 MAGI1Q96QZ7 1491 aaPredicted RBP24.63■■□□□ 1.53
RNF31-223ENST00000560754 ARAP1Q96P48 1450 aa24.58■■□□□ 1.53
RNF31-223ENST00000560754 GAPVD1Q14C86 1478 aa24.56■■□□□ 1.52
RNF31-223ENST00000560754 CLASP1Q7Z460 1538 aa24.56■■□□□ 1.52
RNF31-223ENST00000560754 SYNJ2O15056 1496 aa24.55■■□□□ 1.52
RNF31-223ENST00000560754 ABCA10Q8WWZ4 1543 aa24.54■■□□□ 1.52
RNF31-223ENST00000560754 SYNJ1O43426 1573 aa24.52■■□□□ 1.52
RNF31-223ENST00000560754 PBRM1Q86U86 1689 aa24.5■■□□□ 1.51
RNF31-223ENST00000560754 ABCA5Q8WWZ7 1642 aa24.47■■□□□ 1.51
RNF31-223ENST00000560754 WRNQ14191 1432 aaPredicted RBP eCLIP24.44■■□□□ 1.5
RNF31-223ENST00000560754 TOP2BQ02880 1626 aa24.4■■□□□ 1.5
RNF31-223ENST00000560754 BIVM-ERCC5R4GMW8 1640 aa24.4■■□□□ 1.5
RNF31-223ENST00000560754 TRHP20396 242 aaPredicted RBP24.38■■□□□ 1.49
RNF31-223ENST00000560754 GRIN2AQ12879 1464 aa24.31■■□□□ 1.48
RNF31-223ENST00000560754 FHAD1B1AJZ9 1412 aa24.25■■□□□ 1.47
RNF31-223ENST00000560754 NUP160Q12769 1436 aa24.25■■□□□ 1.47
RNF31-223ENST00000560754 ADAMTS12P58397 1594 aa24.25■■□□□ 1.47
RNF31-223ENST00000560754 ERICH3Q5RHP9 1530 aa24.23■■□□□ 1.47
RNF31-223ENST00000560754 CEP170Q5SW79 1584 aa24.2■■□□□ 1.47
RNF31-223ENST00000560754 ERCC6L2Q5T890 1561 aa24.16■■□□□ 1.46
RNF31-223ENST00000560754 SHROOM2Q13796 1616 aa24.15■■□□□ 1.46
RNF31-223ENST00000560754 JPH4Q96JJ6 628 aa24.06■■□□□ 1.44
RNF31-223ENST00000560754 PRG4Q92954 1404 aaPredicted RBP24.01■■□□□ 1.43
RNF31-223ENST00000560754 IGF1RP08069 1367 aa23.98■■□□□ 1.43
RNF31-223ENST00000560754 KIF27Q86VH2 1401 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 222.2 ms