RNA–Protein interactions for RNA: ENST00000546125.1

KNTC1-215, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 624 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-215ENST00000546125 AEBP2Q6ZN18 517 aaPredicted RBP14.43□□□□□ -0.1
KNTC1-215ENST00000546125 CHIC1Q5VXU3 224 aa13.9□□□□□ -0.18
KNTC1-215ENST00000546125 SENP3Q9H4L4 574 aaPredicted RBP12.39□□□□□ -0.43
KNTC1-215ENST00000546125 PHF23Q9BUL5 403 aaPredicted RBP12.22□□□□□ -0.45
KNTC1-215ENST00000546125 FOXD1Q16676 465 aa11.58□□□□□ -0.56
KNTC1-215ENST00000546125 POTEDQ86YR6 584 aa11.41□□□□□ -0.58
KNTC1-215ENST00000546125 PLPPR3Q6T4P5 718 aa11.24□□□□□ -0.61
KNTC1-215ENST00000546125 MSH5O43196 834 aa11.01□□□□□ -0.65
KNTC1-215ENST00000546125 ADRA2BP18089 450 aa10.85□□□□□ -0.67
KNTC1-215ENST00000546125 PPP6R1Q9UPN7 881 aa10.84□□□□□ -0.67
KNTC1-215ENST00000546125 PIAS4Q8N2W9 510 aaPredicted RBP10.72□□□□□ -0.69
KNTC1-215ENST00000546125 PPP4R3CPQ6ZMV5 832 aa9.92□□□□□ -0.82
KNTC1-215ENST00000546125 SCAF1Q9H7N4 1312 aaKnown RBP9.9□□□□□ -0.82
KNTC1-215ENST00000546125 MAPK8IP2Q13387 824 aaPredicted RBP9.89□□□□□ -0.83
KNTC1-215ENST00000546125 DMRT2Q9Y5R5 561 aa9.75□□□□□ -0.85
KNTC1-215ENST00000546125 CACNB1Q02641 598 aaPredicted RBP9.69□□□□□ -0.86
KNTC1-215ENST00000546125 CNKSR2Q8WXI2 1034 aa9.64□□□□□ -0.87
KNTC1-215ENST00000546125 NCBP3Q53F19 620 aaKnown RBP9.63□□□□□ -0.87
KNTC1-215ENST00000546125 KCNA4P22459 653 aa9.57□□□□□ -0.88
KNTC1-215ENST00000546125 NPM3O75607 178 aaKnown RBP9.47□□□□□ -0.89
KNTC1-215ENST00000546125 RNF216Q9NWF9 866 aaPredicted RBP9.47□□□□□ -0.89
KNTC1-215ENST00000546125 HOXD11P31277 338 aaPredicted RBP9.45□□□□□ -0.9
KNTC1-215ENST00000546125 DCAF8L1A6NGE4 600 aa9.38□□□□□ -0.91
KNTC1-215ENST00000546125 RNF39Q9H2S5 420 aa9.35□□□□□ -0.91
KNTC1-215ENST00000546125 C1QBPQ07021 282 aaKnown RBP9.21□□□□□ -0.94
KNTC1-215ENST00000546125 DNAJC5BQ9UF47 199 aa9.12□□□□□ -0.95
KNTC1-215ENST00000546125 SLC4A1APQ9BWU0 796 aaKnown RBP9.1□□□□□ -0.95
KNTC1-215ENST00000546125 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.07□□□□□ -0.96
KNTC1-215ENST00000546125 SLC4A2P04920 1241 aa8.97□□□□□ -0.97
KNTC1-215ENST00000546125 POTEHQ6S545 545 aa8.87□□□□□ -0.99
KNTC1-215ENST00000546125 U3KPZ7 1027 aaPredicted RBP8.87□□□□□ -0.99
KNTC1-215ENST00000546125 FOXD4L1Q9NU39 408 aa8.81□□□□□ -1
KNTC1-215ENST00000546125 ZBTB22O15209 634 aa8.78□□□□□ -1
KNTC1-215ENST00000546125 MYCNP04198 464 aaPredicted RBP8.74□□□□□ -1.01
KNTC1-215ENST00000546125 EHMT2Q96KQ7 1210 aa8.74□□□□□ -1.01
KNTC1-215ENST00000546125 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.71□□□□□ -1.02
KNTC1-215ENST00000546125 HNRNPUL2Q1KMD3 747 aaKnown RBP8.71□□□□□ -1.02
KNTC1-215ENST00000546125 SAMD1Q6SPF0 538 aaPredicted RBP8.68□□□□□ -1.02
KNTC1-215ENST00000546125 SPINK5Q9NQ38 1064 aaPredicted RBP8.68□□□□□ -1.02
KNTC1-215ENST00000546125 CAPN15O75808 1086 aa8.67□□□□□ -1.02
KNTC1-215ENST00000546125 CSRNP3Q8WYN3 585 aa8.66□□□□□ -1.02
KNTC1-215ENST00000546125 APLP2Q06481 763 aa8.65□□□□□ -1.02
KNTC1-215ENST00000546125 DSG3P32926 999 aa8.63□□□□□ -1.03
KNTC1-215ENST00000546125 TRHP20396 242 aaPredicted RBP8.62□□□□□ -1.03
KNTC1-215ENST00000546125 ZNF219Q9P2Y4 722 aaPredicted RBP8.55□□□□□ -1.04
KNTC1-215ENST00000546125 ATF5Q9Y2D1 282 aaPredicted RBP8.55□□□□□ -1.04
KNTC1-215ENST00000546125 ABCB7O75027 752 aa8.5□□□□□ -1.05
KNTC1-215ENST00000546125 ATXN8OSP0DMR3 200 aa8.5□□□□□ -1.05
KNTC1-215ENST00000546125 POLA2Q14181 598 aa8.43□□□□□ -1.06
KNTC1-215ENST00000546125 RBM42Q9BTD8 480 aaKnown RBP8.24□□□□□ -1.09
KNTC1-215ENST00000546125 ZBTB12Q9Y330 459 aaPredicted RBP8.23□□□□□ -1.09
KNTC1-215ENST00000546125 CHRDL2Q6WN34 429 aa8.21□□□□□ -1.1
KNTC1-215ENST00000546125 FBLN2P98095 1184 aa8.2□□□□□ -1.1
KNTC1-215ENST00000546125 MKRN4PQ13434 485 aaPredicted RBP8.15□□□□□ -1.1
KNTC1-215ENST00000546125 OSCARQ8IYS5 282 aa8.13□□□□□ -1.11
KNTC1-215ENST00000546125 SP7Q8TDD2 431 aaPredicted RBP8.12□□□□□ -1.11
KNTC1-215ENST00000546125 SPDYE2BA6NHP3 402 aa8.01□□□□□ -1.13
KNTC1-215ENST00000546125 SPDYE6P0CI01 402 aa8.01□□□□□ -1.13
KNTC1-215ENST00000546125 SPDYE2Q495Y8 402 aa8.01□□□□□ -1.13
KNTC1-215ENST00000546125 ZNF692Q9BU19 519 aaPredicted RBP8.01□□□□□ -1.13
KNTC1-215ENST00000546125 AKT1S1Q96B36 256 aa7.98□□□□□ -1.13
KNTC1-215ENST00000546125 SPDYE4A6NLX3 237 aa7.94□□□□□ -1.14
KNTC1-215ENST00000546125 REM2Q8IYK8 340 aaPredicted RBP7.93□□□□□ -1.14
KNTC1-215ENST00000546125 PIP4P2Q8N4L2 257 aa7.93□□□□□ -1.14
KNTC1-215ENST00000546125 SSUH2Q9Y2M2 353 aa7.92□□□□□ -1.14
KNTC1-215ENST00000546125 HAX1O00165 279 aa7.91□□□□□ -1.14
KNTC1-215ENST00000546125 PABPN1Q86U42 306 aaKnown RBP eCLIP7.89□□□□□ -1.152e-7■■■■□ 20.5
KNTC1-215ENST00000546125 FKBP8Q14318 412 aa7.85□□□□□ -1.15
KNTC1-215ENST00000546125 FXR2P51116 673 aaKnown RBP eCLIP7.84□□□□□ -1.15
KNTC1-215ENST00000546125 CLEC11AQ9Y240 323 aa7.84□□□□□ -1.15
KNTC1-215ENST00000546125 PITPNM1O00562 1244 aa7.83□□□□□ -1.16
KNTC1-215ENST00000546125 SPDYE1Q8NFV5 336 aaPredicted RBP7.82□□□□□ -1.16
KNTC1-215ENST00000546125 EVX2Q03828 476 aa7.77□□□□□ -1.17
KNTC1-215ENST00000546125 PRR29P0C7W0 189 aa7.73□□□□□ -1.17
KNTC1-215ENST00000546125 PROM2Q8N271 834 aa7.72□□□□□ -1.17
KNTC1-215ENST00000546125 STAG3Q9UJ98 1225 aa7.72□□□□□ -1.17
KNTC1-215ENST00000546125 PRKAR2AP13861 404 aaKnown RBP7.65□□□□□ -1.18
KNTC1-215ENST00000546125 CHADLQ6NUI6 762 aa7.64□□□□□ -1.19
KNTC1-215ENST00000546125 LHX8Q68G74 356 aa7.63□□□□□ -1.19
KNTC1-215ENST00000546125 C19orf67A6NJJ6 358 aa7.59□□□□□ -1.19
KNTC1-215ENST00000546125 GABBR2O75899 941 aa7.58□□□□□ -1.2
KNTC1-215ENST00000546125 CREBZFQ9NS37 354 aa7.58□□□□□ -1.2
KNTC1-215ENST00000546125 FBXO3Q9UK99 471 aa7.58□□□□□ -1.2
KNTC1-215ENST00000546125 MIER1Q8N108 512 aa7.57□□□□□ -1.2
KNTC1-215ENST00000546125 PLCD3Q8N3E9 789 aa7.54□□□□□ -1.2
KNTC1-215ENST00000546125 FARP1Q9Y4F1 1045 aaPredicted RBP7.53□□□□□ -1.2
KNTC1-215ENST00000546125 PLEKHG5O94827 1062 aa7.52□□□□□ -1.21
KNTC1-215ENST00000546125 VASPP50552 380 aaPredicted RBP7.48□□□□□ -1.21
KNTC1-215ENST00000546125 NPM1P06748 294 aaKnown RBP eCLIP7.47□□□□□ -1.21
KNTC1-215ENST00000546125 MNX1P50219 401 aaPredicted RBP7.47□□□□□ -1.21
KNTC1-215ENST00000546125 PLSCR2Q9NRY7 297 aa7.45□□□□□ -1.22
KNTC1-215ENST00000546125 KLHL34Q8N239 644 aa7.44□□□□□ -1.22
KNTC1-215ENST00000546125 CD44P16070 742 aaKnown RBP7.42□□□□□ -1.22
KNTC1-215ENST00000546125 POTEIP0CG38 1075 aa7.41□□□□□ -1.22
KNTC1-215ENST00000546125 ZBTB47Q9UFB7 747 aaPredicted RBP7.41□□□□□ -1.22
KNTC1-215ENST00000546125 IFNLR1Q8IU57 520 aaPredicted RBP7.38□□□□□ -1.23
KNTC1-215ENST00000546125 ZRANB1Q9UGI0 708 aa7.38□□□□□ -1.23
KNTC1-215ENST00000546125 PAK3O75914 559 aaPredicted RBP7.37□□□□□ -1.23
KNTC1-215ENST00000546125 TSPYL2Q9H2G4 693 aaPredicted RBP7.37□□□□□ -1.23
KNTC1-215ENST00000546125 CLCN6P51797 869 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms