RNA–Protein interactions for RNA: ENST00000594259.1

SARS2-206, Transcript of seryl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene SARS2, Length 690 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SARS2-206ENST00000594259 NISCHQ9Y2I1 1504 aa33.4■■■□□ 2.94
SARS2-206ENST00000594259 ABCC9O60706 1549 aa30.27■■■□□ 2.44
SARS2-206ENST00000594259 CCDC180Q9P1Z9 1646 aa29.92■■■□□ 2.38
SARS2-206ENST00000594259 DNAJC5BQ9UF47 199 aa28.67■■■□□ 2.18
SARS2-206ENST00000594259 RB1CC1Q8TDY2 1594 aa28.66■■■□□ 2.18
SARS2-206ENST00000594259 NACADO15069 1562 aa28.4■■■□□ 2.14
SARS2-206ENST00000594259 DCAF8L2P0C7V8 631 aa28.26■■■□□ 2.11
SARS2-206ENST00000594259 PABPN1Q86U42 306 aaKnown RBP eCLIP28.16■■■□□ 2.11e-6■■■■□ 20.6
SARS2-206ENST00000594259 MYO15BQ96JP2 1530 aa27.99■■■□□ 2.07
SARS2-206ENST00000594259 UNC13AQ9UPW8 1703 aa27.93■■■□□ 2.06
SARS2-206ENST00000594259 BICRAQ9NZM4 1560 aa27.82■■■□□ 2.04
SARS2-206ENST00000594259 ZCCHC6Q5VYS8 1495 aaKnown RBP27.71■■■□□ 2.03
SARS2-206ENST00000594259 DCAF1Q9Y4B6 1507 aa27.69■■■□□ 2.02
SARS2-206ENST00000594259 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
SARS2-206ENST00000594259 CECR2Q9BXF3 1484 aa27.31■■□□□ 1.96
SARS2-206ENST00000594259 CC2D2AQ9P2K1 1620 aa27.3■■□□□ 1.96
SARS2-206ENST00000594259 SCRIBQ14160 1630 aa27.27■■□□□ 1.96
SARS2-206ENST00000594259 EIF4G1Q04637 1599 aaKnown RBP27.18■■□□□ 1.94
SARS2-206ENST00000594259 DNAJC5Q9H3Z4 198 aa26.55■■□□□ 1.84
SARS2-206ENST00000594259 NCAPD3P42695 1498 aa26.24■■□□□ 1.79
SARS2-206ENST00000594259 CUX2O14529 1486 aa26.22■■□□□ 1.79
SARS2-206ENST00000594259 ERCC6Q03468 1493 aa26.17■■□□□ 1.78
SARS2-206ENST00000594259 ATAD2BQ9ULI0 1458 aa26.11■■□□□ 1.77
SARS2-206ENST00000594259 SMARCA2P51531 1590 aa26.02■■□□□ 1.76
SARS2-206ENST00000594259 HMGXB3Q12766 1538 aa25.99■■□□□ 1.75
SARS2-206ENST00000594259 SMARCA4P51532 1647 aa25.99■■□□□ 1.75
SARS2-206ENST00000594259 BAZ1AQ9NRL2 1556 aaPredicted RBP25.98■■□□□ 1.75
SARS2-206ENST00000594259 NESP48681 1621 aa25.91■■□□□ 1.74
SARS2-206ENST00000594259 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
SARS2-206ENST00000594259 PEG3Q9GZU2 1588 aa25.75■■□□□ 1.71
SARS2-206ENST00000594259 THOC2Q8NI27 1593 aaKnown RBP25.68■■□□□ 1.7
SARS2-206ENST00000594259 LAMC3Q9Y6N6 1575 aa25.67■■□□□ 1.7
SARS2-206ENST00000594259 MROH2BQ7Z745 1585 aa25.65■■□□□ 1.7
SARS2-206ENST00000594259 PDS5BQ9NTI5 1447 aa25.57■■□□□ 1.68
SARS2-206ENST00000594259 KIF21AQ7Z4S6 1674 aa25.52■■□□□ 1.68
SARS2-206ENST00000594259 CADPSQ9ULU8 1353 aa25.44■■□□□ 1.66
SARS2-206ENST00000594259 MRC2Q9UBG0 1479 aa25.35■■□□□ 1.65
SARS2-206ENST00000594259 WIZO95785 1651 aa25.32■■□□□ 1.64
SARS2-206ENST00000594259 RSF1Q96T23 1441 aaPredicted RBP25.29■■□□□ 1.64
SARS2-206ENST00000594259 WDR62O43379 1518 aa25.28■■□□□ 1.64
SARS2-206ENST00000594259 TRIM41Q8WV44 630 aa25.28■■□□□ 1.64
SARS2-206ENST00000594259 CEP164Q9UPV0 1460 aa25.2■■□□□ 1.62
SARS2-206ENST00000594259 FANCD2Q9BXW9 1451 aa25.15■■□□□ 1.62
SARS2-206ENST00000594259 TOP2AP11388 1531 aaKnown RBP25.14■■□□□ 1.62
SARS2-206ENST00000594259 CFTRP13569 1480 aa25.08■■□□□ 1.6
SARS2-206ENST00000594259 OSCARQ8IYS5 282 aa25■■□□□ 1.59
SARS2-206ENST00000594259 URB2Q14146 1524 aaKnown RBP24.94■■□□□ 1.58
SARS2-206ENST00000594259 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.57
SARS2-206ENST00000594259 IFT140Q96RY7 1462 aa24.71■■□□□ 1.55
SARS2-206ENST00000594259 PRDM2Q13029 1718 aa24.71■■□□□ 1.55
SARS2-206ENST00000594259 ZNF608Q9ULD9 1512 aaPredicted RBP24.69■■□□□ 1.54
SARS2-206ENST00000594259 ABCC8Q09428 1581 aa24.65■■□□□ 1.54
SARS2-206ENST00000594259 RIMBP3CA6NJZ7 1639 aa24.64■■□□□ 1.54
SARS2-206ENST00000594259 RIMBP3BA6NNM3 1639 aa24.64■■□□□ 1.54
SARS2-206ENST00000594259 RIMBP3Q9UFD9 1639 aa24.64■■□□□ 1.54
SARS2-206ENST00000594259 TOPBP1Q92547 1522 aa24.62■■□□□ 1.53
SARS2-206ENST00000594259 ARHGEF11O15085 1522 aa24.56■■□□□ 1.52
SARS2-206ENST00000594259 EIF4G3O43432 1585 aaKnown RBP24.5■■□□□ 1.51
SARS2-206ENST00000594259 DNMBPQ6XZF7 1577 aa24.5■■□□□ 1.51
SARS2-206ENST00000594259 SUPT5HO00267 1087 aaKnown RBP24.45■■□□□ 1.5
SARS2-206ENST00000594259 AQRO60306 1485 aaKnown RBP eCLIP24.45■■□□□ 1.5
SARS2-206ENST00000594259 CYB5RLQ6IPT4 315 aa24.44■■□□□ 1.5
SARS2-206ENST00000594259 TARBP1Q13395 1621 aaKnown RBP24.39■■□□□ 1.5
SARS2-206ENST00000594259 FBLN2P98095 1184 aa24.38■■□□□ 1.49
SARS2-206ENST00000594259 POLA1P09884 1462 aaPredicted RBP24.36■■□□□ 1.49
SARS2-206ENST00000594259 CHD1O14646 1710 aa24.35■■□□□ 1.49
SARS2-206ENST00000594259 ARAP1Q96P48 1450 aa24.31■■□□□ 1.48
SARS2-206ENST00000594259 RAD54L2Q9Y4B4 1467 aa24.28■■□□□ 1.48
SARS2-206ENST00000594259 TRHP20396 242 aaPredicted RBP24.27■■□□□ 1.48
SARS2-206ENST00000594259 TDRD9Q8NDG6 1382 aaKnown RBP24.26■■□□□ 1.47
SARS2-206ENST00000594259 SOGA1O94964 1423 aa24.26■■□□□ 1.47
SARS2-206ENST00000594259 SNAPC4Q5SXM2 1469 aa24.18■■□□□ 1.46
SARS2-206ENST00000594259 FGD5Q6ZNL6 1462 aa24.16■■□□□ 1.46
SARS2-206ENST00000594259 CHMP7Q8WUX9 453 aaPredicted RBP24.15■■□□□ 1.46
SARS2-206ENST00000594259 WDR97A6NE52 1622 aa24.14■■□□□ 1.46
SARS2-206ENST00000594259 CUX1P39880 1505 aa24.1■■□□□ 1.45
SARS2-206ENST00000594259 CLASP1Q7Z460 1538 aa24.1■■□□□ 1.45
SARS2-206ENST00000594259 MAGI1Q96QZ7 1491 aaPredicted RBP24.1■■□□□ 1.45
SARS2-206ENST00000594259 SYNJ1O43426 1573 aa24.08■■□□□ 1.45
SARS2-206ENST00000594259 GRIN2BQ13224 1484 aa24.07■■□□□ 1.44
SARS2-206ENST00000594259 SYNJ2O15056 1496 aa24.03■■□□□ 1.44
SARS2-206ENST00000594259 WRNQ14191 1432 aaPredicted RBP eCLIP23.98■■□□□ 1.43
SARS2-206ENST00000594259 GAPVD1Q14C86 1478 aa23.94■■□□□ 1.42
SARS2-206ENST00000594259 ABCA10Q8WWZ4 1543 aa23.93■■□□□ 1.42
SARS2-206ENST00000594259 PBRM1Q86U86 1689 aa23.89■■□□□ 1.42
SARS2-206ENST00000594259 TOP2BQ02880 1626 aa23.85■■□□□ 1.41
SARS2-206ENST00000594259 ABCA5Q8WWZ7 1642 aa23.83■■□□□ 1.41
SARS2-206ENST00000594259 BIVM-ERCC5R4GMW8 1640 aa23.81■■□□□ 1.4
SARS2-206ENST00000594259 AEBP2Q6ZN18 517 aaPredicted RBP23.79■■□□□ 1.4
SARS2-206ENST00000594259 GRIN2AQ12879 1464 aa23.75■■□□□ 1.39
SARS2-206ENST00000594259 ERCC6L2Q5T890 1561 aa23.7■■□□□ 1.38
SARS2-206ENST00000594259 NUP160Q12769 1436 aa23.69■■□□□ 1.38
SARS2-206ENST00000594259 ADAMTS12P58397 1594 aa23.69■■□□□ 1.38
SARS2-206ENST00000594259 CEP170Q5SW79 1584 aa23.67■■□□□ 1.38
SARS2-206ENST00000594259 ERICH3Q5RHP9 1530 aa23.67■■□□□ 1.38
SARS2-206ENST00000594259 FHAD1B1AJZ9 1412 aa23.67■■□□□ 1.38
SARS2-206ENST00000594259 SHROOM2Q13796 1616 aa23.58■■□□□ 1.36
SARS2-206ENST00000594259 KIF27Q86VH2 1401 aa23.53■■□□□ 1.36
SARS2-206ENST00000594259 PRG4Q92954 1404 aaPredicted RBP23.5■■□□□ 1.35
SARS2-206ENST00000594259 JPH4Q96JJ6 628 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms