RNA–Protein interactions for RNA: ENST00000425394.6

PAN2-202, Transcript of poly(A) specific ribonuclease subunit PAN2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAN2, Length 5,372 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAN2-202ENST00000425394 MYT1Q01538 1121 aa15.75■□□□□ 0.11
PAN2-202ENST00000425394 PELP1Q8IZL8 1130 aaKnown RBP15.59■□□□□ 0.09
PAN2-202ENST00000425394 DCAF8L2P0C7V8 631 aa15.57■□□□□ 0.08
PAN2-202ENST00000425394 NISCHQ9Y2I1 1504 aa15.02□□□□□ -0.01
PAN2-202ENST00000425394 SUPT5HO00267 1087 aaKnown RBP14.74□□□□□ -0.05
PAN2-202ENST00000425394 TTBK1Q5TCY1 1321 aaPredicted RBP14.59□□□□□ -0.07
PAN2-202ENST00000425394 ZEB1P37275 1124 aaPredicted RBP14.49□□□□□ -0.09
PAN2-202ENST00000425394 SHROOM4Q9ULL8 1493 aa14.44□□□□□ -0.1
PAN2-202ENST00000425394 CENPBP07199 599 aaPredicted RBP14.44□□□□□ -0.1
PAN2-202ENST00000425394 CCER1Q8TC90 406 aaPredicted RBP14.35□□□□□ -0.11
PAN2-202ENST00000425394 APLP2Q06481 763 aa14.24□□□□□ -0.13
PAN2-202ENST00000425394 FAM9AQ8IZU1 332 aaPredicted RBP14.17□□□□□ -0.14
PAN2-202ENST00000425394 ERICH6Q7L0X2 663 aa14.15□□□□□ -0.14
PAN2-202ENST00000425394 EHMT2Q96KQ7 1210 aa14.12□□□□□ -0.15
PAN2-202ENST00000425394 YTHDC1Q96MU7 727 aaKnown RBP14□□□□□ -0.17
PAN2-202ENST00000425394 HRCP23327 699 aa13.91□□□□□ -0.18
PAN2-202ENST00000425394 TRIM41Q8WV44 630 aa13.77□□□□□ -0.21
PAN2-202ENST00000425394 PCGF6Q9BYE7 350 aa13.75□□□□□ -0.21
PAN2-202ENST00000425394 NEFLP07196 543 aa13.72□□□□□ -0.21
PAN2-202ENST00000425394 UBTFP17480 764 aaKnown RBP13.61□□□□□ -0.23
PAN2-202ENST00000425394 RANGAP1P46060 587 aaPredicted RBP13.61□□□□□ -0.23
PAN2-202ENST00000425394 ATP1B4Q9UN42 357 aaPredicted RBP13.6□□□□□ -0.23
PAN2-202ENST00000425394 MYT1LQ9UL68 1186 aa13.59□□□□□ -0.23
PAN2-202ENST00000425394 CLSPNQ9HAW4 1339 aa13.58□□□□□ -0.23
PAN2-202ENST00000425394 TRIM26Q12899 539 aaPredicted RBP13.55□□□□□ -0.24
PAN2-202ENST00000425394 RTL5Q5HYW3 569 aaPredicted RBP13.37□□□□□ -0.27
PAN2-202ENST00000425394 GLIPR1L2Q4G1C9 344 aa13.32□□□□□ -0.28
PAN2-202ENST00000425394 DAXXQ9UER7 740 aaPredicted RBP13.26□□□□□ -0.29
PAN2-202ENST00000425394 ACIN1Q9UKV3 1341 aaKnown RBP13.21□□□□□ -0.29
PAN2-202ENST00000425394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.18□□□□□ -0.3
PAN2-202ENST00000425394 HNRNPUL2Q1KMD3 747 aaKnown RBP13.18□□□□□ -0.3
PAN2-202ENST00000425394 GTF3C3Q9Y5Q9 886 aa13.13□□□□□ -0.31
PAN2-202ENST00000425394 DIEXFQ68CQ4 756 aaKnown RBP13.13□□□□□ -0.31
PAN2-202ENST00000425394 PPARGC1BQ86YN6 1023 aaKnown RBP13.12□□□□□ -0.31
PAN2-202ENST00000425394 ITGAEP38570 1179 aa13.07□□□□□ -0.32
PAN2-202ENST00000425394 CHIC1Q5VXU3 224 aa13.07□□□□□ -0.32
PAN2-202ENST00000425394 CDK11AQ9UQ88 783 aaPredicted RBP13.01□□□□□ -0.33
PAN2-202ENST00000425394 POLR3GLQ9BT43 218 aa12.99□□□□□ -0.33
PAN2-202ENST00000425394 LOC105371045A0A1W2PR82 267 aa12.96□□□□□ -0.33
PAN2-202ENST00000425394 ZNF316A6NFI3 1004 aaPredicted RBP12.96□□□□□ -0.34
PAN2-202ENST00000425394 DCAF1Q9Y4B6 1507 aa12.93□□□□□ -0.34
PAN2-202ENST00000425394 ABCC9O60706 1549 aa12.91□□□□□ -0.34
PAN2-202ENST00000425394 ANP32EQ9BTT0 268 aa12.89□□□□□ -0.35
PAN2-202ENST00000425394 PABPN1Q86U42 306 aaKnown RBP eCLIP12.84□□□□□ -0.358e-11■■■■□ 20.6
PAN2-202ENST00000425394 FAM50AQ14320 339 aaKnown RBP12.84□□□□□ -0.35
PAN2-202ENST00000425394 ANP32AP39687 249 aaKnown RBP12.83□□□□□ -0.36
PAN2-202ENST00000425394 SLC4A1APQ9BWU0 796 aaKnown RBP12.81□□□□□ -0.36
PAN2-202ENST00000425394 TRIM52Q96A61 297 aa12.79□□□□□ -0.36
PAN2-202ENST00000425394 SCAF1Q9H7N4 1312 aaKnown RBP12.77□□□□□ -0.37
PAN2-202ENST00000425394 CNGB1Q14028 1251 aaPredicted RBP12.73□□□□□ -0.37
PAN2-202ENST00000425394 BCL11AQ9H165 835 aa12.72□□□□□ -0.37
PAN2-202ENST00000425394 CCDC180Q9P1Z9 1646 aa12.67□□□□□ -0.38
PAN2-202ENST00000425394 EIF5BO60841 1220 aaKnown RBP12.66□□□□□ -0.38
PAN2-202ENST00000425394 NEUROD1Q13562 356 aa12.65□□□□□ -0.38
PAN2-202ENST00000425394 FBLN2P98095 1184 aa12.64□□□□□ -0.39
PAN2-202ENST00000425394 ERICH6BQ5W0A0 696 aa12.64□□□□□ -0.39
PAN2-202ENST00000425394 ANP32CO43423 234 aa12.63□□□□□ -0.39
PAN2-202ENST00000425394 ANP32BQ92688 251 aaKnown RBP12.63□□□□□ -0.39
PAN2-202ENST00000425394 NCLP19338 710 aaKnown RBP12.61□□□□□ -0.39
PAN2-202ENST00000425394 CSRNP3Q8WYN3 585 aa12.6□□□□□ -0.39
PAN2-202ENST00000425394 TNNT2P45379 298 aaPredicted RBP12.58□□□□□ -0.4
PAN2-202ENST00000425394 ZNF326Q5BKZ1 582 aaKnown RBP12.57□□□□□ -0.4
PAN2-202ENST00000425394 ZBTB47Q9UFB7 747 aaPredicted RBP12.57□□□□□ -0.4
PAN2-202ENST00000425394 NEFMP07197 916 aa12.53□□□□□ -0.4
PAN2-202ENST00000425394 DDRGK1Q96HY6 314 aa12.52□□□□□ -0.41
PAN2-202ENST00000425394 TRIM44Q96DX7 344 aaPredicted RBP12.5□□□□□ -0.41
PAN2-202ENST00000425394 PPM1GO15355 546 aaPredicted RBP12.47□□□□□ -0.41
PAN2-202ENST00000425394 P3H3Q8IVL6 736 aa12.46□□□□□ -0.41
PAN2-202ENST00000425394 SCRIBQ14160 1630 aa12.46□□□□□ -0.42
PAN2-202ENST00000425394 CANXP27824 592 aaKnown RBP12.45□□□□□ -0.42
PAN2-202ENST00000425394 BCANQ96GW7 911 aa12.45□□□□□ -0.42
PAN2-202ENST00000425394 ZNF777Q9ULD5 760 aaPredicted RBP12.43□□□□□ -0.42
PAN2-202ENST00000425394 ZCCHC6Q5VYS8 1495 aaKnown RBP12.42□□□□□ -0.42
PAN2-202ENST00000425394 FKBP8Q14318 412 aa12.42□□□□□ -0.42
PAN2-202ENST00000425394 ESF1Q9H501 851 aaKnown RBP12.41□□□□□ -0.42
PAN2-202ENST00000425394 ARID3CA6NKF2 412 aa12.38□□□□□ -0.43
PAN2-202ENST00000425394 NPM1P06748 294 aaKnown RBP eCLIP12.38□□□□□ -0.43
PAN2-202ENST00000425394 TONSLQ96HA7 1378 aa12.35□□□□□ -0.43
PAN2-202ENST00000425394 SLC24A1O60721 1099 aa12.35□□□□□ -0.43
PAN2-202ENST00000425394 UPF2Q9HAU5 1272 aaKnown RBP12.34□□□□□ -0.43
PAN2-202ENST00000425394 STAG3Q9UJ98 1225 aa12.31□□□□□ -0.44
PAN2-202ENST00000425394 ARID4BQ4LE39 1312 aaPredicted RBP12.29□□□□□ -0.44
PAN2-202ENST00000425394 L1TD1Q5T7N2 865 aaKnown RBP12.28□□□□□ -0.44
PAN2-202ENST00000425394 NOP58Q9Y2X3 529 aaKnown RBP12.27□□□□□ -0.45
PAN2-202ENST00000425394 RSPH6AQ9H0K4 717 aa12.26□□□□□ -0.45
PAN2-202ENST00000425394 BECN1Q14457 450 aa12.26□□□□□ -0.45
PAN2-202ENST00000425394 CHGAP10645 457 aaKnown RBP12.25□□□□□ -0.45
PAN2-202ENST00000425394 CDK11BP21127 795 aaKnown RBP12.24□□□□□ -0.45
PAN2-202ENST00000425394 DEKP35659 375 aaKnown RBP12.24□□□□□ -0.45
PAN2-202ENST00000425394 NBR1Q14596 966 aa12.24□□□□□ -0.45
PAN2-202ENST00000425394 TSPY4P0CV99 314 aa12.23□□□□□ -0.45
PAN2-202ENST00000425394 TSPY10P0CW01 314 aa12.23□□□□□ -0.45
PAN2-202ENST00000425394 RB1CC1Q8TDY2 1594 aa12.22□□□□□ -0.45
PAN2-202ENST00000425394 MTUS2Q5JR59 1369 aa12.2□□□□□ -0.46
PAN2-202ENST00000425394 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.19□□□□□ -0.46
PAN2-202ENST00000425394 EEA1Q15075 1411 aa12.19□□□□□ -0.46
PAN2-202ENST00000425394 CHMP7Q8WUX9 453 aaPredicted RBP12.19□□□□□ -0.46
PAN2-202ENST00000425394 SUPT16HQ9Y5B9 1047 aaKnown RBP12.19□□□□□ -0.46
PAN2-202ENST00000425394 HSP90AA1P07900 732 aaKnown RBP12.18□□□□□ -0.46
PAN2-202ENST00000425394 CCDC136Q96JN2 1154 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms