Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RGPD4Q7Z3J3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
RGPD4Q7Z3J3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.73■■■□□ 2.51
RGPD4Q7Z3J3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC30.72■■■□□ 2.51
RGPD4Q7Z3J3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
RGPD4Q7Z3J3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC30.72■■■□□ 2.51
RGPD4Q7Z3J3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
RGPD4Q7Z3J3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC30.71■■■□□ 2.51
RGPD4Q7Z3J3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
RGPD4Q7Z3J3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
RGPD4Q7Z3J3 AC091305.1-201ENST00000479476 895 ntBASIC30.7■■■□□ 2.51
RGPD4Q7Z3J3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
RGPD4Q7Z3J3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC30.7■■■□□ 2.51
RGPD4Q7Z3J3 RARRES2P11-201ENST00000635158 484 ntBASIC30.7■■■□□ 2.51
RGPD4Q7Z3J3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
RGPD4Q7Z3J3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.5
RGPD4Q7Z3J3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
RGPD4Q7Z3J3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
RGPD4Q7Z3J3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC30.69■■■□□ 2.5
RGPD4Q7Z3J3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
RGPD4Q7Z3J3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
RGPD4Q7Z3J3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC30.69■■■□□ 2.5
RGPD4Q7Z3J3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC30.69■■■□□ 2.5
RGPD4Q7Z3J3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.69■■■□□ 2.5
RGPD4Q7Z3J3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.69■■■□□ 2.5
RGPD4Q7Z3J3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.69■■■□□ 2.5
RGPD4Q7Z3J3 AL449106.1-201ENST00000608517 1980 ntBASIC30.68■■■□□ 2.5
RGPD4Q7Z3J3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
RGPD4Q7Z3J3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.67■■■□□ 2.5
RGPD4Q7Z3J3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC30.67■■■□□ 2.5
RGPD4Q7Z3J3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC30.67■■■□□ 2.5
RGPD4Q7Z3J3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.67■■■□□ 2.5
RGPD4Q7Z3J3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
RGPD4Q7Z3J3 SRD5A1P1-201ENST00000442297 786 ntBASIC30.66■■■□□ 2.5
RGPD4Q7Z3J3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC30.66■■■□□ 2.5
RGPD4Q7Z3J3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC30.66■■■□□ 2.5
RGPD4Q7Z3J3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC30.66■■■□□ 2.5
RGPD4Q7Z3J3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.65■■■□□ 2.5
RGPD4Q7Z3J3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
RGPD4Q7Z3J3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.65■■■□□ 2.5
RGPD4Q7Z3J3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
RGPD4Q7Z3J3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
RGPD4Q7Z3J3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
RGPD4Q7Z3J3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC30.64■■■□□ 2.49
RGPD4Q7Z3J3 MIR6722-201ENST00000617286 78 ntBASIC30.64■■■□□ 2.49
RGPD4Q7Z3J3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
RGPD4Q7Z3J3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
RGPD4Q7Z3J3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
RGPD4Q7Z3J3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
RGPD4Q7Z3J3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
RGPD4Q7Z3J3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
RGPD4Q7Z3J3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
RGPD4Q7Z3J3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.62■■■□□ 2.49
RGPD4Q7Z3J3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC30.62■■■□□ 2.49
RGPD4Q7Z3J3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
RGPD4Q7Z3J3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC30.61■■■□□ 2.49
RGPD4Q7Z3J3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
RGPD4Q7Z3J3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
RGPD4Q7Z3J3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
RGPD4Q7Z3J3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
RGPD4Q7Z3J3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
RGPD4Q7Z3J3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.6■■■□□ 2.49
RGPD4Q7Z3J3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RGPD4Q7Z3J3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
RGPD4Q7Z3J3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.6■■■□□ 2.49
RGPD4Q7Z3J3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC30.6■■■□□ 2.49
RGPD4Q7Z3J3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RGPD4Q7Z3J3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RGPD4Q7Z3J3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
RGPD4Q7Z3J3 DUX4L19-201ENST00000557448 1267 ntBASIC30.59■■■□□ 2.49
RGPD4Q7Z3J3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
RGPD4Q7Z3J3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
RGPD4Q7Z3J3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
RGPD4Q7Z3J3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
RGPD4Q7Z3J3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC30.59■■■□□ 2.49
RGPD4Q7Z3J3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
RGPD4Q7Z3J3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC30.58■■■□□ 2.49
RGPD4Q7Z3J3 AC027682.1-201ENST00000562846 899 ntBASIC30.58■■■□□ 2.49
RGPD4Q7Z3J3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
RGPD4Q7Z3J3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC30.57■■■□□ 2.48
RGPD4Q7Z3J3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC30.57■■■□□ 2.48
RGPD4Q7Z3J3 CA15P2-201ENST00000611168 834 ntBASIC30.57■■■□□ 2.48
RGPD4Q7Z3J3 RASA4CP-201ENST00000424092 1398 ntBASIC30.57■■■□□ 2.48
RGPD4Q7Z3J3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC30.56■■■□□ 2.48
RGPD4Q7Z3J3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RGPD4Q7Z3J3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RGPD4Q7Z3J3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
RGPD4Q7Z3J3 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.55■■■□□ 2.48
RGPD4Q7Z3J3 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
RGPD4Q7Z3J3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RGPD4Q7Z3J3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
RGPD4Q7Z3J3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RGPD4Q7Z3J3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
RGPD4Q7Z3J3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
RGPD4Q7Z3J3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC30.53■■■□□ 2.48
RGPD4Q7Z3J3 IKBKGP1-201ENST00000612193 1073 ntBASIC30.53■■■□□ 2.48
RGPD4Q7Z3J3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RGPD4Q7Z3J3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RGPD4Q7Z3J3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
RGPD4Q7Z3J3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC30.52■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms