Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SHFQ7M4L6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHFQ7M4L6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SHFQ7M4L6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
SHFQ7M4L6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
SHFQ7M4L6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SHFQ7M4L6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SHFQ7M4L6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHFQ7M4L6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.22■□□□□ 0.99
SHFQ7M4L6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.22■□□□□ 0.99
SHFQ7M4L6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SHFQ7M4L6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHFQ7M4L6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHFQ7M4L6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SHFQ7M4L6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHFQ7M4L6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHFQ7M4L6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.22■□□□□ 0.99
SHFQ7M4L6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SHFQ7M4L6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SHFQ7M4L6 LINC00543-201ENST00000567234 1845 ntBASIC21.22■□□□□ 0.99
SHFQ7M4L6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHFQ7M4L6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHFQ7M4L6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHFQ7M4L6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHFQ7M4L6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
SHFQ7M4L6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SHFQ7M4L6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHFQ7M4L6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHFQ7M4L6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SHFQ7M4L6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHFQ7M4L6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.2■□□□□ 0.98
SHFQ7M4L6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SHFQ7M4L6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.2■□□□□ 0.98
SHFQ7M4L6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SHFQ7M4L6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.2■□□□□ 0.98
SHFQ7M4L6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SHFQ7M4L6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHFQ7M4L6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHFQ7M4L6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHFQ7M4L6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SHFQ7M4L6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SHFQ7M4L6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SHFQ7M4L6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.19■□□□□ 0.98
SHFQ7M4L6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
SHFQ7M4L6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.19■□□□□ 0.98
SHFQ7M4L6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
SHFQ7M4L6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHFQ7M4L6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SHFQ7M4L6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHFQ7M4L6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHFQ7M4L6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHFQ7M4L6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHFQ7M4L6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SHFQ7M4L6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHFQ7M4L6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHFQ7M4L6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.17■□□□□ 0.98
SHFQ7M4L6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.17■□□□□ 0.98
SHFQ7M4L6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.17■□□□□ 0.98
SHFQ7M4L6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.17■□□□□ 0.98
SHFQ7M4L6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHFQ7M4L6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHFQ7M4L6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.17■□□□□ 0.98
SHFQ7M4L6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHFQ7M4L6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHFQ7M4L6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHFQ7M4L6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.16■□□□□ 0.98
SHFQ7M4L6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.16■□□□□ 0.98
SHFQ7M4L6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SHFQ7M4L6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.16■□□□□ 0.98
SHFQ7M4L6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHFQ7M4L6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHFQ7M4L6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SHFQ7M4L6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHFQ7M4L6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SHFQ7M4L6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHFQ7M4L6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.15■□□□□ 0.98
SHFQ7M4L6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHFQ7M4L6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SHFQ7M4L6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
SHFQ7M4L6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SHFQ7M4L6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SHFQ7M4L6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SHFQ7M4L6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
SHFQ7M4L6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
SHFQ7M4L6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.14■□□□□ 0.97
SHFQ7M4L6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SHFQ7M4L6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SHFQ7M4L6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHFQ7M4L6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SHFQ7M4L6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SHFQ7M4L6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SHFQ7M4L6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHFQ7M4L6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHFQ7M4L6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHFQ7M4L6 AC068473.5-201ENST00000616428 2072 ntBASIC21.14■□□□□ 0.97
SHFQ7M4L6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHFQ7M4L6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.14■□□□□ 0.97
SHFQ7M4L6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.14■□□□□ 0.97
SHFQ7M4L6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SHFQ7M4L6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms