Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
FOXR1Q6PIV2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.39■■□□□ 1.49
FOXR1Q6PIV2 MIR219A2-201ENST00000608502 1504 ntBASIC24.39■■□□□ 1.49
FOXR1Q6PIV2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
FOXR1Q6PIV2 AC097639.1-201ENST00000565519 1891 ntBASIC24.38■■□□□ 1.49
FOXR1Q6PIV2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.38■■□□□ 1.49
FOXR1Q6PIV2 AC148477.6-201ENST00000623746 465 ntBASIC24.38■■□□□ 1.49
FOXR1Q6PIV2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
FOXR1Q6PIV2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
FOXR1Q6PIV2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
FOXR1Q6PIV2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
FOXR1Q6PIV2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
FOXR1Q6PIV2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
FOXR1Q6PIV2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
FOXR1Q6PIV2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
FOXR1Q6PIV2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
FOXR1Q6PIV2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.37■■□□□ 1.49
FOXR1Q6PIV2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
FOXR1Q6PIV2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
FOXR1Q6PIV2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
FOXR1Q6PIV2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
FOXR1Q6PIV2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
FOXR1Q6PIV2 LINC01124-201ENST00000409786 2117 ntBASIC24.36■■□□□ 1.49
FOXR1Q6PIV2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.36■■□□□ 1.49
FOXR1Q6PIV2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
FOXR1Q6PIV2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
FOXR1Q6PIV2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.36■■□□□ 1.49
FOXR1Q6PIV2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
FOXR1Q6PIV2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
FOXR1Q6PIV2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
FOXR1Q6PIV2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
FOXR1Q6PIV2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.35■■□□□ 1.49
FOXR1Q6PIV2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
FOXR1Q6PIV2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.35■■□□□ 1.49
FOXR1Q6PIV2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
FOXR1Q6PIV2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
FOXR1Q6PIV2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.34■■□□□ 1.49
FOXR1Q6PIV2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
FOXR1Q6PIV2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
FOXR1Q6PIV2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
FOXR1Q6PIV2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
FOXR1Q6PIV2 C9orf163-202ENST00000624034 2573 ntBASIC24.34■■□□□ 1.49
FOXR1Q6PIV2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
FOXR1Q6PIV2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
FOXR1Q6PIV2 AL024507.2-201ENST00000606070 2574 ntBASIC24.33■■□□□ 1.49
FOXR1Q6PIV2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC24.33■■□□□ 1.49
FOXR1Q6PIV2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
FOXR1Q6PIV2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
FOXR1Q6PIV2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
FOXR1Q6PIV2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.33■■□□□ 1.49
FOXR1Q6PIV2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
FOXR1Q6PIV2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
FOXR1Q6PIV2 AC010501.1-201ENST00000606270 1962 ntBASIC24.33■■□□□ 1.48
FOXR1Q6PIV2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
FOXR1Q6PIV2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
FOXR1Q6PIV2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
FOXR1Q6PIV2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.32■■□□□ 1.48
FOXR1Q6PIV2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
FOXR1Q6PIV2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
FOXR1Q6PIV2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
FOXR1Q6PIV2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
FOXR1Q6PIV2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
FOXR1Q6PIV2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.31■■□□□ 1.48
FOXR1Q6PIV2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
FOXR1Q6PIV2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
FOXR1Q6PIV2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.31■■□□□ 1.48
FOXR1Q6PIV2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
FOXR1Q6PIV2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
FOXR1Q6PIV2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
FOXR1Q6PIV2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
FOXR1Q6PIV2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
FOXR1Q6PIV2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
FOXR1Q6PIV2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
FOXR1Q6PIV2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
FOXR1Q6PIV2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
FOXR1Q6PIV2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
FOXR1Q6PIV2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
FOXR1Q6PIV2 DUSP8P5-201ENST00000422884 1815 ntBASIC24.29■■□□□ 1.48
FOXR1Q6PIV2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
FOXR1Q6PIV2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
FOXR1Q6PIV2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
FOXR1Q6PIV2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
FOXR1Q6PIV2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
FOXR1Q6PIV2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
FOXR1Q6PIV2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
FOXR1Q6PIV2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
FOXR1Q6PIV2 TSPY13P-201ENST00000338964 914 ntBASIC24.28■■□□□ 1.48
FOXR1Q6PIV2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
FOXR1Q6PIV2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
FOXR1Q6PIV2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
FOXR1Q6PIV2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
FOXR1Q6PIV2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
FOXR1Q6PIV2 KRT18P60-201ENST00000312876 1297 ntBASIC24.27■■□□□ 1.48
FOXR1Q6PIV2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.27■■□□□ 1.48
FOXR1Q6PIV2 AC004987.1-201ENST00000428627 508 ntBASIC24.27■■□□□ 1.48
FOXR1Q6PIV2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.27■■□□□ 1.48
FOXR1Q6PIV2 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.27■■□□□ 1.48
FOXR1Q6PIV2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
FOXR1Q6PIV2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
FOXR1Q6PIV2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms