Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.89■□□□□ 0.77
TRAV20A0A0B4J274 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.89■□□□□ 0.77
TRAV20A0A0B4J274 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV20A0A0B4J274 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TRAV20A0A0B4J274 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAV20A0A0B4J274 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TRAV20A0A0B4J274 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.88■□□□□ 0.77
TRAV20A0A0B4J274 AC022616.5-201ENST00000518796 181 ntBASIC19.88■□□□□ 0.77
TRAV20A0A0B4J274 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TRAV20A0A0B4J274 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.87■□□□□ 0.77
TRAV20A0A0B4J274 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAV20A0A0B4J274 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAV20A0A0B4J274 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TRAV20A0A0B4J274 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRAV20A0A0B4J274 GUSBP5-201ENST00000418136 578 ntBASIC19.87■□□□□ 0.77
TRAV20A0A0B4J274 AC142472.1-201ENST00000612013 1741 ntBASIC19.87■□□□□ 0.77
TRAV20A0A0B4J274 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV20A0A0B4J274 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV20A0A0B4J274 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV20A0A0B4J274 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV20A0A0B4J274 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV20A0A0B4J274 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAV20A0A0B4J274 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV20A0A0B4J274 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.86■□□□□ 0.77
TRAV20A0A0B4J274 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAV20A0A0B4J274 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV20A0A0B4J274 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV20A0A0B4J274 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV20A0A0B4J274 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV20A0A0B4J274 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
TRAV20A0A0B4J274 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV20A0A0B4J274 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV20A0A0B4J274 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TRAV20A0A0B4J274 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TRAV20A0A0B4J274 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.85■□□□□ 0.77
TRAV20A0A0B4J274 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.85■□□□□ 0.77
TRAV20A0A0B4J274 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TRAV20A0A0B4J274 BX255925.1-201ENST00000566954 1854 ntBASIC19.85■□□□□ 0.77
TRAV20A0A0B4J274 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV20A0A0B4J274 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV20A0A0B4J274 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV20A0A0B4J274 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV20A0A0B4J274 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV20A0A0B4J274 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV20A0A0B4J274 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.84■□□□□ 0.77
TRAV20A0A0B4J274 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV20A0A0B4J274 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV20A0A0B4J274 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TRAV20A0A0B4J274 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV20A0A0B4J274 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.83■□□□□ 0.77
TRAV20A0A0B4J274 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV20A0A0B4J274 Z92544.1-202ENST00000571933 1220 ntBASIC19.83■□□□□ 0.77
TRAV20A0A0B4J274 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.83■□□□□ 0.76
TRAV20A0A0B4J274 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV20A0A0B4J274 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
TRAV20A0A0B4J274 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
TRAV20A0A0B4J274 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV20A0A0B4J274 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV20A0A0B4J274 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRAV20A0A0B4J274 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRAV20A0A0B4J274 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV20A0A0B4J274 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV20A0A0B4J274 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV20A0A0B4J274 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV20A0A0B4J274 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV20A0A0B4J274 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRAV20A0A0B4J274 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV20A0A0B4J274 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV20A0A0B4J274 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV20A0A0B4J274 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV20A0A0B4J274 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV20A0A0B4J274 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV20A0A0B4J274 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV20A0A0B4J274 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
TRAV20A0A0B4J274 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV20A0A0B4J274 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAV20A0A0B4J274 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV20A0A0B4J274 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.8■□□□□ 0.76
TRAV20A0A0B4J274 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV20A0A0B4J274 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV20A0A0B4J274 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV20A0A0B4J274 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TRAV20A0A0B4J274 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAV20A0A0B4J274 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV20A0A0B4J274 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV20A0A0B4J274 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV20A0A0B4J274 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV20A0A0B4J274 AC239859.2-201ENST00000444165 318 ntBASIC19.79■□□□□ 0.76
TRAV20A0A0B4J274 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAV20A0A0B4J274 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAV20A0A0B4J274 AC131212.1-201ENST00000613771 668 ntBASIC19.79■□□□□ 0.76
TRAV20A0A0B4J274 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV20A0A0B4J274 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV20A0A0B4J274 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAV20A0A0B4J274 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV20A0A0B4J274 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV20A0A0B4J274 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV20A0A0B4J274 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV20A0A0B4J274 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TRAV20A0A0B4J274 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms