Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.31■□□□□ 0.52
TRBV7-1A0A0A6YYK4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV7-1A0A0A6YYK4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV7-1A0A0A6YYK4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV7-1A0A0A6YYK4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRBV7-1A0A0A6YYK4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV7-1A0A0A6YYK4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV7-1A0A0A6YYK4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV7-1A0A0A6YYK4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRBV7-1A0A0A6YYK4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV7-1A0A0A6YYK4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV7-1A0A0A6YYK4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
TRBV7-1A0A0A6YYK4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV7-1A0A0A6YYK4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
TRBV7-1A0A0A6YYK4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.3■□□□□ 0.52
TRBV7-1A0A0A6YYK4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.3■□□□□ 0.52
TRBV7-1A0A0A6YYK4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV7-1A0A0A6YYK4 AC138932.3-201ENST00000567634 1902 ntBASIC18.29■□□□□ 0.52
TRBV7-1A0A0A6YYK4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.29■□□□□ 0.52
TRBV7-1A0A0A6YYK4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV7-1A0A0A6YYK4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.29■□□□□ 0.52
TRBV7-1A0A0A6YYK4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV7-1A0A0A6YYK4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV7-1A0A0A6YYK4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.29■□□□□ 0.52
TRBV7-1A0A0A6YYK4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV7-1A0A0A6YYK4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.29■□□□□ 0.52
TRBV7-1A0A0A6YYK4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV7-1A0A0A6YYK4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.28■□□□□ 0.52
TRBV7-1A0A0A6YYK4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TRBV7-1A0A0A6YYK4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV7-1A0A0A6YYK4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV7-1A0A0A6YYK4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV7-1A0A0A6YYK4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.28■□□□□ 0.52
TRBV7-1A0A0A6YYK4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV7-1A0A0A6YYK4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV7-1A0A0A6YYK4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.27■□□□□ 0.52
TRBV7-1A0A0A6YYK4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV7-1A0A0A6YYK4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV7-1A0A0A6YYK4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.27■□□□□ 0.52
TRBV7-1A0A0A6YYK4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.27■□□□□ 0.52
TRBV7-1A0A0A6YYK4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV7-1A0A0A6YYK4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.27■□□□□ 0.52
TRBV7-1A0A0A6YYK4 MIR6089-201ENST00000616698 64 ntBASIC18.27■□□□□ 0.52
TRBV7-1A0A0A6YYK4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.27■□□□□ 0.52
TRBV7-1A0A0A6YYK4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV7-1A0A0A6YYK4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRBV7-1A0A0A6YYK4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV7-1A0A0A6YYK4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV7-1A0A0A6YYK4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV7-1A0A0A6YYK4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV7-1A0A0A6YYK4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV7-1A0A0A6YYK4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV7-1A0A0A6YYK4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV7-1A0A0A6YYK4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.26■□□□□ 0.51
TRBV7-1A0A0A6YYK4 AC139795.1-202ENST00000500444 432 ntBASIC18.26■□□□□ 0.51
TRBV7-1A0A0A6YYK4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV7-1A0A0A6YYK4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV7-1A0A0A6YYK4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV7-1A0A0A6YYK4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV7-1A0A0A6YYK4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV7-1A0A0A6YYK4 AL592295.1-201ENST00000400984 884 ntBASIC18.25■□□□□ 0.51
TRBV7-1A0A0A6YYK4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV7-1A0A0A6YYK4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV7-1A0A0A6YYK4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TRBV7-1A0A0A6YYK4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV7-1A0A0A6YYK4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV7-1A0A0A6YYK4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV7-1A0A0A6YYK4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV7-1A0A0A6YYK4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.24■□□□□ 0.51
TRBV7-1A0A0A6YYK4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.24■□□□□ 0.51
TRBV7-1A0A0A6YYK4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV7-1A0A0A6YYK4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV7-1A0A0A6YYK4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV7-1A0A0A6YYK4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV7-1A0A0A6YYK4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV7-1A0A0A6YYK4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV7-1A0A0A6YYK4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV7-1A0A0A6YYK4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV7-1A0A0A6YYK4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV7-1A0A0A6YYK4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV7-1A0A0A6YYK4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV7-1A0A0A6YYK4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV7-1A0A0A6YYK4 ATP5G2P3-201ENST00000429083 425 ntBASIC18.23■□□□□ 0.51
TRBV7-1A0A0A6YYK4 LONRF2P2-201ENST00000439212 571 ntBASIC18.23■□□□□ 0.51
TRBV7-1A0A0A6YYK4 DUX4L18-201ENST00000553347 1267 ntBASIC18.23■□□□□ 0.51
TRBV7-1A0A0A6YYK4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.23■□□□□ 0.51
TRBV7-1A0A0A6YYK4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRBV7-1A0A0A6YYK4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV7-1A0A0A6YYK4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV7-1A0A0A6YYK4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV7-1A0A0A6YYK4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV7-1A0A0A6YYK4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV7-1A0A0A6YYK4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.22■□□□□ 0.51
TRBV7-1A0A0A6YYK4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.22■□□□□ 0.51
TRBV7-1A0A0A6YYK4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV7-1A0A0A6YYK4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRBV7-1A0A0A6YYK4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV7-1A0A0A6YYK4 TSPY13P-201ENST00000338964 914 ntBASIC18.22■□□□□ 0.51
TRBV7-1A0A0A6YYK4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.22■□□□□ 0.51
TRBV7-1A0A0A6YYK4 AC019171.1-201ENST00000601251 1056 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms