Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 AL645929.1-201ENST00000420084 975 ntBASIC15.4■□□□□ 0.06
AP4S1Q9Y587 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 LINC01238-205ENST00000567549 1107 ntBASIC15.4■□□□□ 0.06
AP4S1Q9Y587 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 AC091167.2-201ENST00000579581 588 ntBASIC15.4■□□□□ 0.06
AP4S1Q9Y587 CYP2A7P1-201ENST00000595391 815 ntBASIC15.4■□□□□ 0.06
AP4S1Q9Y587 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 AC104581.4-201ENST00000623126 3052 ntBASIC15.4■□□□□ 0.06
AP4S1Q9Y587 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.06
AP4S1Q9Y587 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 RNF152P1-201ENST00000397754 604 ntBASIC15.39■□□□□ 0.05
AP4S1Q9Y587 AC026396.1-201ENST00000419388 421 ntBASIC15.39■□□□□ 0.05
AP4S1Q9Y587 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.39■□□□□ 0.05
AP4S1Q9Y587 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 CICP4-201ENST00000447359 2812 ntBASIC15.38■□□□□ 0.05
AP4S1Q9Y587 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4S1Q9Y587 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms