Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 AC092384.3-202ENST00000564646 2873 ntBASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 HCG4-201ENST00000418983 998 ntBASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 PRSS29P-201ENST00000440800 595 ntBASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 RPL13AP23-201ENST00000480739 586 ntBASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 LINC02447-202ENST00000501888 2146 ntBASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 AC005412.3-201ENST00000580309 715 ntBASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 AC010654.1-201ENST00000615722 808 ntBASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 CDC14C-201ENST00000428251 1719 ntBASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 AC104109.2-201ENST00000602919 1418 ntBASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 AC009947.1-201ENST00000444350 727 ntBASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 MIR4751-201ENST00000578027 74 ntBASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIN7CQ9NUP9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 SLC22A20-204ENST00000530038 1673 ntBASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 AL022342.1-201ENST00000400363 863 ntBASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 CRYGEP-201ENST00000412192 528 ntBASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms