Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS2Q99743 AC023274.1-201ENST00000418278 595 ntBASIC15.95■□□□□ 0.14
NPAS2Q99743 VN2R19P-201ENST00000442399 1052 ntBASIC15.95■□□□□ 0.14
NPAS2Q99743 HCG4B-203ENST00000450128 991 ntBASIC15.95■□□□□ 0.14
NPAS2Q99743 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.95■□□□□ 0.14
NPAS2Q99743 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS2Q99743 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.95■□□□□ 0.14
NPAS2Q99743 OR7E47P-204ENST00000575924 449 ntBASIC15.95■□□□□ 0.14
NPAS2Q99743 MIR4751-201ENST00000578027 74 ntBASIC15.95■□□□□ 0.14
NPAS2Q99743 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.95■□□□□ 0.14
NPAS2Q99743 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.95■□□□□ 0.14
NPAS2Q99743 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
NPAS2Q99743 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS2Q99743 TOP3BP1-201ENST00000420768 1380 ntBASIC15.95■□□□□ 0.14
NPAS2Q99743 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS2Q99743 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS2Q99743 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS2Q99743 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS2Q99743 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
NPAS2Q99743 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS2Q99743 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS2Q99743 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS2Q99743 KRT8P39-201ENST00000396270 1433 ntBASIC15.94■□□□□ 0.14
NPAS2Q99743 PPT1-215ENST00000641471 2368 ntBASIC15.94■□□□□ 0.14
NPAS2Q99743 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.94■□□□□ 0.14
NPAS2Q99743 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 TNRC18P2-201ENST00000417666 2714 ntBASIC15.94■□□□□ 0.14
NPAS2Q99743 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.94■□□□□ 0.14
NPAS2Q99743 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.94■□□□□ 0.14
NPAS2Q99743 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
NPAS2Q99743 YBX2P1-201ENST00000394192 760 ntBASIC15.94■□□□□ 0.14
NPAS2Q99743 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.94■□□□□ 0.14
NPAS2Q99743 IGLL3P-201ENST00000412472 434 ntBASIC15.94■□□□□ 0.14
NPAS2Q99743 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.94■□□□□ 0.14
NPAS2Q99743 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.94■□□□□ 0.14
NPAS2Q99743 AC040169.1-201ENST00000565382 521 ntBASIC15.94■□□□□ 0.14
NPAS2Q99743 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NPAS2Q99743 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.94■□□□□ 0.14
NPAS2Q99743 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
NPAS2Q99743 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
NPAS2Q99743 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 LINC02228-204ENST00000642115 2962 ntBASIC15.94■□□□□ 0.14
NPAS2Q99743 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.94■□□□□ 0.14
NPAS2Q99743 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.94■□□□□ 0.14
NPAS2Q99743 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NPAS2Q99743 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.94■□□□□ 0.14
NPAS2Q99743 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS2Q99743 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS2Q99743 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS2Q99743 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.93■□□□□ 0.14
NPAS2Q99743 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS2Q99743 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS2Q99743 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS2Q99743 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS2Q99743 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
NPAS2Q99743 PCGF3-213ENST00000620529 1899 ntBASIC15.93■□□□□ 0.14
NPAS2Q99743 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
NPAS2Q99743 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
NPAS2Q99743 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS2Q99743 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
NPAS2Q99743 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NPAS2Q99743 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS2Q99743 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
NPAS2Q99743 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS2Q99743 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS2Q99743 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
NPAS2Q99743 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
NPAS2Q99743 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS2Q99743 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NPAS2Q99743 CRYGEP-201ENST00000412192 528 ntBASIC15.93■□□□□ 0.14
NPAS2Q99743 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.93■□□□□ 0.14
NPAS2Q99743 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.93■□□□□ 0.14
NPAS2Q99743 PRSS29P-201ENST00000440800 595 ntBASIC15.93■□□□□ 0.14
NPAS2Q99743 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.93■□□□□ 0.14
NPAS2Q99743 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.93■□□□□ 0.14
NPAS2Q99743 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.93■□□□□ 0.14
NPAS2Q99743 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.93■□□□□ 0.14
NPAS2Q99743 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS2Q99743 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS2Q99743 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS2Q99743 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
NPAS2Q99743 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms