Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.07
FNDC9Q8TBE3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
FNDC9Q8TBE3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 KLF2P3-201ENST00000451977 1087 ntBASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 AC125807.1-201ENST00000483097 614 ntBASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FNDC9Q8TBE3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 DUX4L27-201ENST00000554796 1261 ntBASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 AC051619.7-201ENST00000568314 623 ntBASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 MIR4453-201ENST00000584019 89 ntBASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 AC018529.1-201ENST00000613063 361 ntBASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 LINC01144-201ENST00000626198 1710 ntBASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 AC011270.2-201ENST00000624293 2550 ntBASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.63□□□□□ -0.07
FNDC9Q8TBE3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms