Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 AP002414.2-201ENST00000591780 3365 ntBASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 AC087163.2-201ENST00000457299 853 ntBASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 AL139424.1-201ENST00000607572 797 ntBASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 AL353732.1-201ENST00000569618 1459 ntBASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 AC093458.2-201ENST00000623150 629 ntBASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 AP001350.2-201ENST00000625104 1094 ntBASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IL1Q8TBN0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB3IL1Q8TBN0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB3IL1Q8TBN0 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RAB3IL1Q8TBN0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.19
RAB3IL1Q8TBN0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RAB3IL1Q8TBN0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 TOB2P1-201ENST00000469761 992 ntBASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 AC092329.2-201ENST00000598402 547 ntBASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 AL589182.2-201ENST00000619332 1049 ntBASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 AL022326.1-202ENST00000641533 845 ntBASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 SLC22A20-204ENST00000530038 1673 ntBASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 AC020658.6-201ENST00000623564 1870 ntBASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms