Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
RFWD2Q8NHY2 SLC22A20-204ENST00000530038 1673 ntBASIC16.14■□□□□ 0.17
RFWD2Q8NHY2 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD2Q8NHY2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD2Q8NHY2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RFWD2Q8NHY2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD2Q8NHY2 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 KRT17P6-201ENST00000453795 1220 ntBASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 CYP2A7P1-201ENST00000595391 815 ntBASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 REXO1L3P-201ENST00000622202 1288 ntBASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 AL592424.1-201ENST00000563624 1536 ntBASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD2Q8NHY2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 PAWRP1-201ENST00000451083 565 ntBASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 MIR3180-1-201ENST00000580374 94 ntBASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 MIR3180-3-201ENST00000584616 94 ntBASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 AC064862.7-201ENST00000604520 867 ntBASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 NPAP1P7-201ENST00000613027 823 ntBASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 NSUN5P1-202ENST00000421140 1535 ntBASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 NSUN5P2-203ENST00000457352 1529 ntBASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD2Q8NHY2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 NCF1C-201ENST00000438382 1427 ntBASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD2Q8NHY2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms