Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
EFCAB3Q8N7B9 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
EFCAB3Q8N7B9 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
EFCAB3Q8N7B9 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
EFCAB3Q8N7B9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
EFCAB3Q8N7B9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.37■□□□□ 0.21
EFCAB3Q8N7B9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
EFCAB3Q8N7B9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
EFCAB3Q8N7B9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
EFCAB3Q8N7B9 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
EFCAB3Q8N7B9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
EFCAB3Q8N7B9 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 AC009268.1-201ENST00000561352 1203 ntBASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 AC080188.3-201ENST00000624842 748 ntBASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 AC010491.1-201ENST00000563101 2797 ntBASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.36■□□□□ 0.21
EFCAB3Q8N7B9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 AC096631.1-202ENST00000440162 917 ntTSL 2 BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 AL157385.1-201ENST00000446973 268 ntBASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 CAB39P1-201ENST00000502277 460 ntBASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 AC010834.3-201ENST00000520562 939 ntTSL 3 BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 RN7SL48P-201ENST00000579283 293 ntBASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EFCAB3Q8N7B9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.34■□□□□ 0.21
EFCAB3Q8N7B9 AC104640.1-201ENST00000562617 2109 ntBASIC16.34■□□□□ 0.21
EFCAB3Q8N7B9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EFCAB3Q8N7B9 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EFCAB3Q8N7B9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.34■□□□□ 0.21
EFCAB3Q8N7B9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms