RNA–Protein interactions for RNA: ENST00000502277.1

CAB39P1-201, Transcript of calcium binding protein 39 pseudogene 1, humanhuman

BASIC

Gene CAB39P1, Length 460 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39P1-201ENST00000502277 AEBP2Q6ZN18 517 aaPredicted RBP34.37■■■■□ 3.09
CAB39P1-201ENST00000502277 CHIC1Q5VXU3 224 aa33.3■■■□□ 2.92
CAB39P1-201ENST00000502277 SENP3Q9H4L4 574 aaPredicted RBP29.31■■■□□ 2.28
CAB39P1-201ENST00000502277 PHF23Q9BUL5 403 aaPredicted RBP29.19■■■□□ 2.26
CAB39P1-201ENST00000502277 FOXD1Q16676 465 aa27.17■■□□□ 1.94
CAB39P1-201ENST00000502277 PLPPR3Q6T4P5 718 aa26.91■■□□□ 1.9
CAB39P1-201ENST00000502277 PPP6R1Q9UPN7 881 aa25.84■■□□□ 1.73
CAB39P1-201ENST00000502277 ADRA2BP18089 450 aa25.79■■□□□ 1.72
CAB39P1-201ENST00000502277 PIAS4Q8N2W9 510 aaPredicted RBP25.55■■□□□ 1.68
CAB39P1-201ENST00000502277 MSH5O43196 834 aa25.28■■□□□ 1.64
CAB39P1-201ENST00000502277 SCAF1Q9H7N4 1312 aaKnown RBP23.72■■□□□ 1.39
CAB39P1-201ENST00000502277 PPP4R3CPQ6ZMV5 832 aa23.62■■□□□ 1.37
CAB39P1-201ENST00000502277 POTEDQ86YR6 584 aa23.55■■□□□ 1.36
CAB39P1-201ENST00000502277 MAPK8IP2Q13387 824 aaPredicted RBP23.49■■□□□ 1.35
CAB39P1-201ENST00000502277 DMRT2Q9Y5R5 561 aa23.32■■□□□ 1.32
CAB39P1-201ENST00000502277 CNKSR2Q8WXI2 1034 aa23.07■■□□□ 1.28
CAB39P1-201ENST00000502277 NCBP3Q53F19 620 aaKnown RBP22.96■■□□□ 1.27
CAB39P1-201ENST00000502277 HOXD11P31277 338 aaPredicted RBP22.72■■□□□ 1.23
CAB39P1-201ENST00000502277 RNF216Q9NWF9 866 aaPredicted RBP22.72■■□□□ 1.23
CAB39P1-201ENST00000502277 KCNA4P22459 653 aa22.65■■□□□ 1.22
CAB39P1-201ENST00000502277 NPM3O75607 178 aaKnown RBP22.56■■□□□ 1.2
CAB39P1-201ENST00000502277 DCAF8L1A6NGE4 600 aa22.26■■□□□ 1.15
CAB39P1-201ENST00000502277 DNAJC5BQ9UF47 199 aa22.08■■□□□ 1.13
CAB39P1-201ENST00000502277 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.62■■□□□ 1.05
CAB39P1-201ENST00000502277 RNF39Q9H2S5 420 aa21.6■■□□□ 1.05
CAB39P1-201ENST00000502277 SLC4A1APQ9BWU0 796 aaKnown RBP21.54■■□□□ 1.04
CAB39P1-201ENST00000502277 SLC4A2P04920 1241 aa21.38■■□□□ 1.01
CAB39P1-201ENST00000502277 C1QBPQ07021 282 aaKnown RBP21.35■■□□□ 1.01
CAB39P1-201ENST00000502277 CACNB1Q02641 598 aaPredicted RBP21.26■□□□□ 0.99
CAB39P1-201ENST00000502277 U3KPZ7 1027 aaPredicted RBP21.22■□□□□ 0.99
CAB39P1-201ENST00000502277 FOXD4L1Q9NU39 408 aa21.01■□□□□ 0.95
CAB39P1-201ENST00000502277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.92■□□□□ 0.94
CAB39P1-201ENST00000502277 HNRNPUL2Q1KMD3 747 aaKnown RBP20.92■□□□□ 0.94
CAB39P1-201ENST00000502277 MYCNP04198 464 aaPredicted RBP20.9■□□□□ 0.94
CAB39P1-201ENST00000502277 ZBTB22O15209 634 aa20.83■□□□□ 0.93
CAB39P1-201ENST00000502277 SAMD1Q6SPF0 538 aaPredicted RBP20.82■□□□□ 0.92
CAB39P1-201ENST00000502277 APLP2Q06481 763 aa20.81■□□□□ 0.92
CAB39P1-201ENST00000502277 SPINK5Q9NQ38 1064 aaPredicted RBP20.69■□□□□ 0.9
CAB39P1-201ENST00000502277 CAPN15O75808 1086 aa20.66■□□□□ 0.9
CAB39P1-201ENST00000502277 ZNF219Q9P2Y4 722 aaPredicted RBP20.53■□□□□ 0.88
CAB39P1-201ENST00000502277 EHMT2Q96KQ7 1210 aa20.47■□□□□ 0.87
CAB39P1-201ENST00000502277 TRHP20396 242 aaPredicted RBP20.45■□□□□ 0.86
CAB39P1-201ENST00000502277 CSRNP3Q8WYN3 585 aa20.43■□□□□ 0.86
CAB39P1-201ENST00000502277 DSG3P32926 999 aa20.41■□□□□ 0.86
CAB39P1-201ENST00000502277 ATXN8OSP0DMR3 200 aa20.35■□□□□ 0.85
CAB39P1-201ENST00000502277 ATF5Q9Y2D1 282 aaPredicted RBP20.27■□□□□ 0.84
CAB39P1-201ENST00000502277 ABCB7O75027 752 aa20.19■□□□□ 0.82
CAB39P1-201ENST00000502277 POLA2Q14181 598 aa20.06■□□□□ 0.8
CAB39P1-201ENST00000502277 ZBTB12Q9Y330 459 aaPredicted RBP19.81■□□□□ 0.76
CAB39P1-201ENST00000502277 FBLN2P98095 1184 aa19.54■□□□□ 0.72
CAB39P1-201ENST00000502277 RBM42Q9BTD8 480 aaKnown RBP19.53■□□□□ 0.72
CAB39P1-201ENST00000502277 MKRN4PQ13434 485 aaPredicted RBP19.4■□□□□ 0.7
CAB39P1-201ENST00000502277 OSCARQ8IYS5 282 aa19.4■□□□□ 0.7
CAB39P1-201ENST00000502277 SPDYE2BA6NHP3 402 aa19.22■□□□□ 0.67
CAB39P1-201ENST00000502277 SPDYE6P0CI01 402 aa19.22■□□□□ 0.67
CAB39P1-201ENST00000502277 SPDYE2Q495Y8 402 aa19.22■□□□□ 0.67
CAB39P1-201ENST00000502277 AKT1S1Q96B36 256 aa19.19■□□□□ 0.66
CAB39P1-201ENST00000502277 ZNF692Q9BU19 519 aaPredicted RBP19.04■□□□□ 0.64
CAB39P1-201ENST00000502277 SSUH2Q9Y2M2 353 aa19.02■□□□□ 0.64
CAB39P1-201ENST00000502277 REM2Q8IYK8 340 aaPredicted RBP18.96■□□□□ 0.63
CAB39P1-201ENST00000502277 SPDYE4A6NLX3 237 aa18.83■□□□□ 0.6
CAB39P1-201ENST00000502277 CHRDL2Q6WN34 429 aa18.8■□□□□ 0.6
CAB39P1-201ENST00000502277 PABPN1Q86U42 306 aaKnown RBP eCLIP18.76■□□□□ 0.59
CAB39P1-201ENST00000502277 PITPNM1O00562 1244 aa18.74■□□□□ 0.59
CAB39P1-201ENST00000502277 SPDYE1Q8NFV5 336 aaPredicted RBP18.72■□□□□ 0.59
CAB39P1-201ENST00000502277 POTEHQ6S545 545 aa18.6■□□□□ 0.57
CAB39P1-201ENST00000502277 CLEC11AQ9Y240 323 aa18.58■□□□□ 0.56
CAB39P1-201ENST00000502277 PROM2Q8N271 834 aa18.52■□□□□ 0.56
CAB39P1-201ENST00000502277 FKBP8Q14318 412 aa18.49■□□□□ 0.55
CAB39P1-201ENST00000502277 FXR2P51116 673 aaKnown RBP eCLIP18.48■□□□□ 0.55
CAB39P1-201ENST00000502277 STAG3Q9UJ98 1225 aa18.47■□□□□ 0.55
CAB39P1-201ENST00000502277 PIP4P2Q8N4L2 257 aa18.46■□□□□ 0.55
CAB39P1-201ENST00000502277 PRR29P0C7W0 189 aa18.4■□□□□ 0.54
CAB39P1-201ENST00000502277 PRKAR2AP13861 404 aaKnown RBP18.26■□□□□ 0.51
CAB39P1-201ENST00000502277 CHADLQ6NUI6 762 aa18.15■□□□□ 0.5
CAB39P1-201ENST00000502277 CREBZFQ9NS37 354 aa18.08■□□□□ 0.48
CAB39P1-201ENST00000502277 FBXO3Q9UK99 471 aa18.02■□□□□ 0.48
CAB39P1-201ENST00000502277 FARP1Q9Y4F1 1045 aaPredicted RBP18■□□□□ 0.47
CAB39P1-201ENST00000502277 HAX1O00165 279 aa17.96■□□□□ 0.47
CAB39P1-201ENST00000502277 PLEKHG5O94827 1062 aa17.89■□□□□ 0.45
CAB39P1-201ENST00000502277 MIER1Q8N108 512 aa17.88■□□□□ 0.45
CAB39P1-201ENST00000502277 C19orf67A6NJJ6 358 aa17.87■□□□□ 0.45
CAB39P1-201ENST00000502277 MNX1P50219 401 aaPredicted RBP17.85■□□□□ 0.45
CAB39P1-201ENST00000502277 PLCD3Q8N3E9 789 aa17.83■□□□□ 0.44
CAB39P1-201ENST00000502277 NPM1P06748 294 aaKnown RBP eCLIP17.82■□□□□ 0.44
CAB39P1-201ENST00000502277 ZBTB47Q9UFB7 747 aaPredicted RBP17.74■□□□□ 0.43
CAB39P1-201ENST00000502277 CD44P16070 742 aaKnown RBP17.73■□□□□ 0.43
CAB39P1-201ENST00000502277 VASPP50552 380 aaPredicted RBP17.73■□□□□ 0.43
CAB39P1-201ENST00000502277 EVX2Q03828 476 aa17.73■□□□□ 0.43
CAB39P1-201ENST00000502277 SP7Q8TDD2 431 aaPredicted RBP17.73■□□□□ 0.43
CAB39P1-201ENST00000502277 PAK3O75914 559 aaPredicted RBP17.61■□□□□ 0.41
CAB39P1-201ENST00000502277 ZRANB1Q9UGI0 708 aa17.57■□□□□ 0.4
CAB39P1-201ENST00000502277 ZNF579Q8NAF0 562 aaKnown RBP17.52■□□□□ 0.4
CAB39P1-201ENST00000502277 CLCN6P51797 869 aa17.49■□□□□ 0.39
CAB39P1-201ENST00000502277 NUBP1P53384 320 aa17.48■□□□□ 0.39
CAB39P1-201ENST00000502277 KLHL34Q8N239 644 aa17.48■□□□□ 0.39
CAB39P1-201ENST00000502277 RASEFQ8IZ41 740 aa17.46■□□□□ 0.39
CAB39P1-201ENST00000502277 TSPYL2Q9H2G4 693 aaPredicted RBP17.44■□□□□ 0.38
CAB39P1-201ENST00000502277 IFNLR1Q8IU57 520 aaPredicted RBP17.43■□□□□ 0.38
CAB39P1-201ENST00000502277 GABBR2O75899 941 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms