RNA–Protein interactions for RNA: ENST00000561352.1

AC009268.1-201, humanhuman

BASIC

Gene AC009268.1, Length 1,203 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009268.1-201ENST00000561352 AEBP2Q6ZN18 517 aaPredicted RBP35.37■■■■□ 3.25
AC009268.1-201ENST00000561352 CHIC1Q5VXU3 224 aa33.81■■■■□ 3
AC009268.1-201ENST00000561352 SENP3Q9H4L4 574 aaPredicted RBP30.05■■■□□ 2.4
AC009268.1-201ENST00000561352 PHF23Q9BUL5 403 aaPredicted RBP29.73■■■□□ 2.35
AC009268.1-201ENST00000561352 FOXD1Q16676 465 aa28.02■■■□□ 2.08
AC009268.1-201ENST00000561352 PLPPR3Q6T4P5 718 aa27.12■■□□□ 1.93
AC009268.1-201ENST00000561352 PPP6R1Q9UPN7 881 aa26.44■■□□□ 1.82
AC009268.1-201ENST00000561352 ADRA2BP18089 450 aa26.36■■□□□ 1.81
AC009268.1-201ENST00000561352 PIAS4Q8N2W9 510 aaPredicted RBP26.24■■□□□ 1.79
AC009268.1-201ENST00000561352 MSH5O43196 834 aa26.07■■□□□ 1.76
AC009268.1-201ENST00000561352 POTEDQ86YR6 584 aa25.01■■□□□ 1.59
AC009268.1-201ENST00000561352 MAPK8IP2Q13387 824 aaPredicted RBP24.14■■□□□ 1.45
AC009268.1-201ENST00000561352 SCAF1Q9H7N4 1312 aaKnown RBP24.04■■□□□ 1.44
AC009268.1-201ENST00000561352 DMRT2Q9Y5R5 561 aa23.89■■□□□ 1.41
AC009268.1-201ENST00000561352 PPP4R3CPQ6ZMV5 832 aa23.83■■□□□ 1.41
AC009268.1-201ENST00000561352 CNKSR2Q8WXI2 1034 aa23.3■■□□□ 1.32
AC009268.1-201ENST00000561352 HOXD11P31277 338 aaPredicted RBP23.12■■□□□ 1.29
AC009268.1-201ENST00000561352 RNF216Q9NWF9 866 aaPredicted RBP23.02■■□□□ 1.28
AC009268.1-201ENST00000561352 NCBP3Q53F19 620 aaKnown RBP22.95■■□□□ 1.26
AC009268.1-201ENST00000561352 DCAF8L1A6NGE4 600 aa22.91■■□□□ 1.26
AC009268.1-201ENST00000561352 NPM3O75607 178 aaKnown RBP22.68■■□□□ 1.22
AC009268.1-201ENST00000561352 KCNA4P22459 653 aa22.52■■□□□ 1.2
AC009268.1-201ENST00000561352 RNF39Q9H2S5 420 aa22.3■■□□□ 1.16
AC009268.1-201ENST00000561352 CACNB1Q02641 598 aaPredicted RBP22.22■■□□□ 1.15
AC009268.1-201ENST00000561352 DNAJC5BQ9UF47 199 aa22.22■■□□□ 1.15
AC009268.1-201ENST00000561352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.03■■□□□ 1.12
AC009268.1-201ENST00000561352 C1QBPQ07021 282 aaKnown RBP21.95■■□□□ 1.1
AC009268.1-201ENST00000561352 U3KPZ7 1027 aaPredicted RBP21.63■■□□□ 1.05
AC009268.1-201ENST00000561352 SLC4A2P04920 1241 aa21.61■■□□□ 1.05
AC009268.1-201ENST00000561352 SLC4A1APQ9BWU0 796 aaKnown RBP21.28■■□□□ 1
AC009268.1-201ENST00000561352 SPINK5Q9NQ38 1064 aaPredicted RBP21.24■□□□□ 0.99
AC009268.1-201ENST00000561352 CAPN15O75808 1086 aa21.16■□□□□ 0.98
AC009268.1-201ENST00000561352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.03■□□□□ 0.96
AC009268.1-201ENST00000561352 HNRNPUL2Q1KMD3 747 aaKnown RBP21.03■□□□□ 0.96
AC009268.1-201ENST00000561352 DSG3P32926 999 aa20.98■□□□□ 0.95
AC009268.1-201ENST00000561352 APLP2Q06481 763 aa20.96■□□□□ 0.95
AC009268.1-201ENST00000561352 SAMD1Q6SPF0 538 aaPredicted RBP20.95■□□□□ 0.94
AC009268.1-201ENST00000561352 MYCNP04198 464 aaPredicted RBP20.94■□□□□ 0.94
AC009268.1-201ENST00000561352 TRHP20396 242 aaPredicted RBP20.9■□□□□ 0.94
AC009268.1-201ENST00000561352 FOXD4L1Q9NU39 408 aa20.89■□□□□ 0.93
AC009268.1-201ENST00000561352 ZNF219Q9P2Y4 722 aaPredicted RBP20.84■□□□□ 0.93
AC009268.1-201ENST00000561352 ZBTB22O15209 634 aa20.73■□□□□ 0.91
AC009268.1-201ENST00000561352 ABCB7O75027 752 aa20.73■□□□□ 0.91
AC009268.1-201ENST00000561352 ATF5Q9Y2D1 282 aaPredicted RBP20.5■□□□□ 0.87
AC009268.1-201ENST00000561352 POLA2Q14181 598 aa20.39■□□□□ 0.85
AC009268.1-201ENST00000561352 ATXN8OSP0DMR3 200 aa20.18■□□□□ 0.82
AC009268.1-201ENST00000561352 CSRNP3Q8WYN3 585 aa20■□□□□ 0.79
AC009268.1-201ENST00000561352 RBM42Q9BTD8 480 aaKnown RBP19.96■□□□□ 0.79
AC009268.1-201ENST00000561352 ZBTB12Q9Y330 459 aaPredicted RBP19.96■□□□□ 0.79
AC009268.1-201ENST00000561352 EHMT2Q96KQ7 1210 aa19.91■□□□□ 0.78
AC009268.1-201ENST00000561352 OSCARQ8IYS5 282 aa19.76■□□□□ 0.75
AC009268.1-201ENST00000561352 POTEHQ6S545 545 aa19.65■□□□□ 0.74
AC009268.1-201ENST00000561352 FBLN2P98095 1184 aa19.6■□□□□ 0.73
AC009268.1-201ENST00000561352 AKT1S1Q96B36 256 aa19.58■□□□□ 0.72
AC009268.1-201ENST00000561352 MKRN4PQ13434 485 aaPredicted RBP19.56■□□□□ 0.72
AC009268.1-201ENST00000561352 CHRDL2Q6WN34 429 aa19.45■□□□□ 0.7
AC009268.1-201ENST00000561352 REM2Q8IYK8 340 aaPredicted RBP19.42■□□□□ 0.7
AC009268.1-201ENST00000561352 SPDYE2BA6NHP3 402 aa19.39■□□□□ 0.69
AC009268.1-201ENST00000561352 SPDYE6P0CI01 402 aa19.39■□□□□ 0.69
AC009268.1-201ENST00000561352 SPDYE2Q495Y8 402 aa19.39■□□□□ 0.69
AC009268.1-201ENST00000561352 PITPNM1O00562 1244 aa19.23■□□□□ 0.67
AC009268.1-201ENST00000561352 ZNF692Q9BU19 519 aaPredicted RBP19.21■□□□□ 0.67
AC009268.1-201ENST00000561352 SSUH2Q9Y2M2 353 aa19.19■□□□□ 0.66
AC009268.1-201ENST00000561352 PIP4P2Q8N4L2 257 aa19.07■□□□□ 0.64
AC009268.1-201ENST00000561352 FXR2P51116 673 aaKnown RBP eCLIP18.99■□□□□ 0.63
AC009268.1-201ENST00000561352 SPDYE1Q8NFV5 336 aaPredicted RBP18.98■□□□□ 0.63
AC009268.1-201ENST00000561352 CLEC11AQ9Y240 323 aa18.96■□□□□ 0.63
AC009268.1-201ENST00000561352 PABPN1Q86U42 306 aaKnown RBP eCLIP18.95■□□□□ 0.62
AC009268.1-201ENST00000561352 SPDYE4A6NLX3 237 aa18.75■□□□□ 0.59
AC009268.1-201ENST00000561352 PRKAR2AP13861 404 aaKnown RBP18.72■□□□□ 0.59
AC009268.1-201ENST00000561352 PRR29P0C7W0 189 aa18.67■□□□□ 0.58
AC009268.1-201ENST00000561352 HAX1O00165 279 aa18.62■□□□□ 0.57
AC009268.1-201ENST00000561352 CHADLQ6NUI6 762 aa18.6■□□□□ 0.57
AC009268.1-201ENST00000561352 SP7Q8TDD2 431 aaPredicted RBP18.54■□□□□ 0.56
AC009268.1-201ENST00000561352 EVX2Q03828 476 aa18.46■□□□□ 0.55
AC009268.1-201ENST00000561352 STAG3Q9UJ98 1225 aa18.44■□□□□ 0.54
AC009268.1-201ENST00000561352 C19orf67A6NJJ6 358 aa18.37■□□□□ 0.53
AC009268.1-201ENST00000561352 PROM2Q8N271 834 aa18.35■□□□□ 0.53
AC009268.1-201ENST00000561352 FARP1Q9Y4F1 1045 aaPredicted RBP18.32■□□□□ 0.52
AC009268.1-201ENST00000561352 CREBZFQ9NS37 354 aa18.3■□□□□ 0.52
AC009268.1-201ENST00000561352 CD44P16070 742 aaKnown RBP18.14■□□□□ 0.49
AC009268.1-201ENST00000561352 FKBP8Q14318 412 aa18.12■□□□□ 0.49
AC009268.1-201ENST00000561352 GABBR2O75899 941 aa18.03■□□□□ 0.48
AC009268.1-201ENST00000561352 MNX1P50219 401 aaPredicted RBP18.03■□□□□ 0.48
AC009268.1-201ENST00000561352 ZRANB1Q9UGI0 708 aa17.93■□□□□ 0.46
AC009268.1-201ENST00000561352 NPM1P06748 294 aaKnown RBP eCLIP17.92■□□□□ 0.46
AC009268.1-201ENST00000561352 ZNF579Q8NAF0 562 aaKnown RBP17.87■□□□□ 0.45
AC009268.1-201ENST00000561352 MIER1Q8N108 512 aa17.84■□□□□ 0.45
AC009268.1-201ENST00000561352 PAK3O75914 559 aaPredicted RBP17.8■□□□□ 0.44
AC009268.1-201ENST00000561352 PLEKHG5O94827 1062 aa17.76■□□□□ 0.43
AC009268.1-201ENST00000561352 CLCN6P51797 869 aa17.76■□□□□ 0.43
AC009268.1-201ENST00000561352 PLCD3Q8N3E9 789 aa17.74■□□□□ 0.43
AC009268.1-201ENST00000561352 PHF12Q96QT6 1004 aa17.73■□□□□ 0.43
AC009268.1-201ENST00000561352 POTEIP0CG38 1075 aa17.68■□□□□ 0.42
AC009268.1-201ENST00000561352 GALR2O43603 387 aaPredicted RBP17.66■□□□□ 0.42
AC009268.1-201ENST00000561352 TSPYL2Q9H2G4 693 aaPredicted RBP17.66■□□□□ 0.42
AC009268.1-201ENST00000561352 FBXO3Q9UK99 471 aa17.6■□□□□ 0.41
AC009268.1-201ENST00000561352 RASEFQ8IZ41 740 aa17.59■□□□□ 0.41
AC009268.1-201ENST00000561352 DCBLD2Q96PD2 775 aa17.58■□□□□ 0.4
AC009268.1-201ENST00000561352 CCDC61Q9Y6R9 512 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms