Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AL645728.2-201ENST00000641974 660 ntBASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01561Q8N1V8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
LINC01561Q8N1V8 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
LINC01561Q8N1V8 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01561Q8N1V8 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01561Q8N1V8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC10.96□□□□□ -0.66
LINC01561Q8N1V8 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01561Q8N1V8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01561Q8N1V8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC10.96□□□□□ -0.66
LINC01561Q8N1V8 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01561Q8N1V8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC10.96□□□□□ -0.66
LINC01561Q8N1V8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01561Q8N1V8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01561Q8N1V8 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC10.96□□□□□ -0.66
LINC01561Q8N1V8 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01561Q8N1V8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 RNU1-129P-201ENST00000384064 167 ntBASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 MRPL20P1-201ENST00000400819 433 ntBASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 FOSL1P1-201ENST00000511041 816 ntBASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 U1.21-201ENST00000580816 167 ntBASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 AC025062.2-201ENST00000605477 670 ntBASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 MIR1199-201ENST00000621445 119 ntBASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 SLC9A7P1-201ENST00000554295 3311 ntBASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
LINC01561Q8N1V8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 AC023157.3-201ENST00000619086 2088 ntBASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 AP001282.1-201ENST00000531301 1499 ntBASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms