Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 TUBB8P12-201ENST00000308911 1335 ntBASIC15.6■□□□□ 0.09
RAB43Q86YS6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 TUBB7P-202ENST00000428444 1305 ntBASIC15.6■□□□□ 0.09
RAB43Q86YS6 TUBB8P7-204ENST00000567960 1332 ntBASIC15.6■□□□□ 0.09
RAB43Q86YS6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
RAB43Q86YS6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RAB43Q86YS6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RAB43Q86YS6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
RAB43Q86YS6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB43Q86YS6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.59■□□□□ 0.09
RAB43Q86YS6 AC055876.3-201ENST00000431496 288 ntBASIC15.59■□□□□ 0.09
RAB43Q86YS6 SPDYE14P-201ENST00000442619 822 ntBASIC15.59■□□□□ 0.09
RAB43Q86YS6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.59■□□□□ 0.09
RAB43Q86YS6 IGHV3-42-201ENST00000520410 361 ntBASIC15.59■□□□□ 0.09
RAB43Q86YS6 ALG1L8P-201ENST00000533887 760 ntBASIC15.59■□□□□ 0.09
RAB43Q86YS6 MIR4745-201ENST00000577608 62 ntBASIC15.59■□□□□ 0.09
RAB43Q86YS6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.59■□□□□ 0.09
RAB43Q86YS6 AC138649.4-201ENST00000612222 287 ntBASIC15.59■□□□□ 0.09
RAB43Q86YS6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.59■□□□□ 0.09
RAB43Q86YS6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB43Q86YS6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB43Q86YS6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
RAB43Q86YS6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RAB43Q86YS6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB43Q86YS6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB43Q86YS6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RAB43Q86YS6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB43Q86YS6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB43Q86YS6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB43Q86YS6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RAB43Q86YS6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.58■□□□□ 0.09
RAB43Q86YS6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.58■□□□□ 0.09
RAB43Q86YS6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB43Q86YS6 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB43Q86YS6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB43Q86YS6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB43Q86YS6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB43Q86YS6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB43Q86YS6 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB43Q86YS6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB43Q86YS6 AC124947.2-201ENST00000547118 1133 ntBASIC15.58■□□□□ 0.08
RAB43Q86YS6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB43Q86YS6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB43Q86YS6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB43Q86YS6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB43Q86YS6 AC105917.1-201ENST00000506637 2539 ntBASIC15.58■□□□□ 0.08
RAB43Q86YS6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RAB43Q86YS6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms