Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 AC105917.1-201ENST00000506637 2539 ntBASIC17.4■□□□□ 0.38
PSEN1P49768 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
PSEN1P49768 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSEN1P49768 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSEN1P49768 RPS26-201ENST00000356464 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSEN1P49768 AL592309.1-201ENST00000443127 649 ntBASIC17.4■□□□□ 0.38
PSEN1P49768 HLA-J-202ENST00000469281 1241 ntBASIC17.4■□□□□ 0.38
PSEN1P49768 RWDD4P1-201ENST00000488019 565 ntBASIC17.4■□□□□ 0.38
PSEN1P49768 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.4■□□□□ 0.38
PSEN1P49768 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.4■□□□□ 0.38
PSEN1P49768 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PSEN1P49768 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PSEN1P49768 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSEN1P49768 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PSEN1P49768 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PSEN1P49768 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.4■□□□□ 0.38
PSEN1P49768 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSEN1P49768 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PSEN1P49768 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSEN1P49768 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PSEN1P49768 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PSEN1P49768 DBET-201ENST00000630918 3363 ntBASIC17.4■□□□□ 0.38
PSEN1P49768 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSEN1P49768 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSEN1P49768 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.4■□□□□ 0.38
PSEN1P49768 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PSEN1P49768 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
PSEN1P49768 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PSEN1P49768 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.39■□□□□ 0.38
PSEN1P49768 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PSEN1P49768 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.39■□□□□ 0.38
PSEN1P49768 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PSEN1P49768 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.39■□□□□ 0.38
PSEN1P49768 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PSEN1P49768 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PSEN1P49768 AC016027.1-202ENST00000607927 1699 ntBASIC17.39■□□□□ 0.37
PSEN1P49768 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSEN1P49768 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PSEN1P49768 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PSEN1P49768 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSEN1P49768 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PSEN1P49768 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PSEN1P49768 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PSEN1P49768 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSEN1P49768 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSEN1P49768 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PSEN1P49768 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.39■□□□□ 0.37
PSEN1P49768 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PSEN1P49768 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PSEN1P49768 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSEN1P49768 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSEN1P49768 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
PSEN1P49768 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.39■□□□□ 0.37
PSEN1P49768 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.39■□□□□ 0.37
PSEN1P49768 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PSEN1P49768 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.39■□□□□ 0.37
PSEN1P49768 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.39■□□□□ 0.37
PSEN1P49768 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.39■□□□□ 0.37
PSEN1P49768 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.39■□□□□ 0.37
PSEN1P49768 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.39■□□□□ 0.37
PSEN1P49768 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.39■□□□□ 0.37
PSEN1P49768 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PSEN1P49768 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSEN1P49768 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSEN1P49768 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PSEN1P49768 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSEN1P49768 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PSEN1P49768 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSEN1P49768 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSEN1P49768 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PSEN1P49768 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.38■□□□□ 0.37
PSEN1P49768 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PSEN1P49768 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.38■□□□□ 0.37
PSEN1P49768 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSEN1P49768 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.38■□□□□ 0.37
PSEN1P49768 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PSEN1P49768 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSEN1P49768 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.38■□□□□ 0.37
PSEN1P49768 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PSEN1P49768 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSEN1P49768 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSEN1P49768 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSEN1P49768 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PSEN1P49768 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PSEN1P49768 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PSEN1P49768 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSEN1P49768 AC240504.1-201ENST00000395709 845 ntBASIC17.38■□□□□ 0.37
PSEN1P49768 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.38■□□□□ 0.37
PSEN1P49768 PAICSP2-201ENST00000429118 1150 ntBASIC17.38■□□□□ 0.37
PSEN1P49768 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC17.38■□□□□ 0.37
PSEN1P49768 AC023141.5-201ENST00000458585 616 ntBASIC17.38■□□□□ 0.37
PSEN1P49768 IGHV3-62-201ENST00000520057 340 ntBASIC17.38■□□□□ 0.37
PSEN1P49768 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.38■□□□□ 0.37
PSEN1P49768 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.38■□□□□ 0.37
PSEN1P49768 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.38■□□□□ 0.37
PSEN1P49768 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.38■□□□□ 0.37
PSEN1P49768 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSEN1P49768 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
PSEN1P49768 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.38■□□□□ 0.37
PSEN1P49768 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms