Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 GOLGA2P5-201ENST00000266746 2395 ntBASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 AC152010.1-201ENST00000415779 2006 ntBASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 AC132938.5-201ENST00000624980 1813 ntBASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 KRT16P2-201ENST00000414673 1423 ntBASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CDC42SE1Q9NRR8 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 DUTP2-201ENST00000519164 463 ntBASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms