Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NICN1Q9BSH3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NICN1Q9BSH3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NICN1Q9BSH3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.03□□□□□ -0.16
NICN1Q9BSH3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NICN1Q9BSH3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 PPT1-215ENST00000641471 2368 ntBASIC14.02□□□□□ -0.16
NICN1Q9BSH3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.02□□□□□ -0.16
NICN1Q9BSH3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NICN1Q9BSH3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NICN1Q9BSH3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.02□□□□□ -0.17
NICN1Q9BSH3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.02□□□□□ -0.17
NICN1Q9BSH3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
NICN1Q9BSH3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NICN1Q9BSH3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.02□□□□□ -0.17
NICN1Q9BSH3 FAM210CP-201ENST00000445714 574 ntBASIC14.02□□□□□ -0.17
NICN1Q9BSH3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.02□□□□□ -0.17
NICN1Q9BSH3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NICN1Q9BSH3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.02□□□□□ -0.17
NICN1Q9BSH3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
NICN1Q9BSH3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.02□□□□□ -0.17
NICN1Q9BSH3 AC025062.2-201ENST00000605477 670 ntBASIC14.02□□□□□ -0.17
NICN1Q9BSH3 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.02□□□□□ -0.17
NICN1Q9BSH3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.02□□□□□ -0.17
NICN1Q9BSH3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NICN1Q9BSH3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NICN1Q9BSH3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NICN1Q9BSH3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NICN1Q9BSH3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NICN1Q9BSH3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NICN1Q9BSH3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.02□□□□□ -0.17
NICN1Q9BSH3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 MIR648-201ENST00000385046 94 ntBASIC14.01□□□□□ -0.17
NICN1Q9BSH3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 AC005412.3-201ENST00000580309 715 ntBASIC14.01□□□□□ -0.17
NICN1Q9BSH3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 AC020765.3-201ENST00000613051 740 ntBASIC14.01□□□□□ -0.17
NICN1Q9BSH3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.01□□□□□ -0.17
NICN1Q9BSH3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NICN1Q9BSH3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms