Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 GAPDHP21-201ENST00000450301 1010 ntBASIC18.09■□□□□ 0.49
TRIM50Q86XT4 RN7SL692P-201ENST00000464677 288 ntBASIC18.09■□□□□ 0.49
TRIM50Q86XT4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM50Q86XT4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM50Q86XT4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM50Q86XT4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
TRIM50Q86XT4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
TRIM50Q86XT4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM50Q86XT4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM50Q86XT4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM50Q86XT4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM50Q86XT4 AC009053.2-201ENST00000563701 2365 ntBASIC18.08■□□□□ 0.48
TRIM50Q86XT4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 SPDYE17-201ENST00000412399 783 ntBASIC18.08■□□□□ 0.48
TRIM50Q86XT4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 ZNF890P-202ENST00000530367 1156 ntBASIC18.08■□□□□ 0.48
TRIM50Q86XT4 AL596325.1-201ENST00000563991 1082 ntBASIC18.08■□□□□ 0.48
TRIM50Q86XT4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 AL033527.5-202ENST00000641632 1098 ntBASIC18.08■□□□□ 0.48
TRIM50Q86XT4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.08■□□□□ 0.48
TRIM50Q86XT4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
TRIM50Q86XT4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM50Q86XT4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM50Q86XT4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM50Q86XT4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRIM50Q86XT4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM50Q86XT4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM50Q86XT4 AC063926.2-201ENST00000623766 1308 ntBASIC18.07■□□□□ 0.48
TRIM50Q86XT4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM50Q86XT4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.07■□□□□ 0.48
TRIM50Q86XT4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM50Q86XT4 AL139010.1-201ENST00000454878 894 ntBASIC18.07■□□□□ 0.48
TRIM50Q86XT4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRIM50Q86XT4 API5-211ENST00000534695 560 ntTSL 5 BASIC18.07■□□□□ 0.48
TRIM50Q86XT4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM50Q86XT4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM50Q86XT4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM50Q86XT4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM50Q86XT4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM50Q86XT4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.07■□□□□ 0.48
TRIM50Q86XT4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM50Q86XT4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM50Q86XT4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 ALOX12P2-203ENST00000570921 1945 ntBASIC18.06■□□□□ 0.48
TRIM50Q86XT4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 SERBP1P3-201ENST00000459980 809 ntBASIC18.06■□□□□ 0.48
TRIM50Q86XT4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM50Q86XT4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms