Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.21■□□□□ 0.51
ASIC1P78348 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ASIC1P78348 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ASIC1P78348 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ASIC1P78348 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.21■□□□□ 0.51
ASIC1P78348 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ASIC1P78348 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ASIC1P78348 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ASIC1P78348 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.21■□□□□ 0.51
ASIC1P78348 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.21■□□□□ 0.51
ASIC1P78348 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
ASIC1P78348 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.5
ASIC1P78348 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ASIC1P78348 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ASIC1P78348 NFIC-211ENST00000641145 8399 ntBASIC18.2■□□□□ 0.5
ASIC1P78348 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ASIC1P78348 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.2■□□□□ 0.5
ASIC1P78348 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ASIC1P78348 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ASIC1P78348 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ASIC1P78348 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ASIC1P78348 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ASIC1P78348 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.2■□□□□ 0.5
ASIC1P78348 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ASIC1P78348 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.2■□□□□ 0.5
ASIC1P78348 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ASIC1P78348 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ASIC1P78348 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ASIC1P78348 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ASIC1P78348 MIR648-201ENST00000385046 94 ntBASIC18.2■□□□□ 0.5
ASIC1P78348 MIR574-201ENST00000385209 96 ntBASIC18.2■□□□□ 0.5
ASIC1P78348 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.2■□□□□ 0.5
ASIC1P78348 FAM58CP-201ENST00000435741 640 ntBASIC18.2■□□□□ 0.5
ASIC1P78348 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.2■□□□□ 0.5
ASIC1P78348 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ASIC1P78348 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ASIC1P78348 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.2■□□□□ 0.5
ASIC1P78348 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.2■□□□□ 0.5
ASIC1P78348 AC040169.1-201ENST00000565382 521 ntBASIC18.2■□□□□ 0.5
ASIC1P78348 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.2■□□□□ 0.5
ASIC1P78348 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.2■□□□□ 0.5
ASIC1P78348 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ASIC1P78348 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ASIC1P78348 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ASIC1P78348 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ASIC1P78348 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.2■□□□□ 0.5
ASIC1P78348 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.2■□□□□ 0.5
ASIC1P78348 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ASIC1P78348 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ASIC1P78348 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ASIC1P78348 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ASIC1P78348 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
ASIC1P78348 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.19■□□□□ 0.5
ASIC1P78348 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ASIC1P78348 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ASIC1P78348 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ASIC1P78348 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ASIC1P78348 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
ASIC1P78348 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ASIC1P78348 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ASIC1P78348 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ASIC1P78348 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.19■□□□□ 0.5
ASIC1P78348 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.19■□□□□ 0.5
ASIC1P78348 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ASIC1P78348 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ASIC1P78348 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ASIC1P78348 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ASIC1P78348 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.19■□□□□ 0.5
ASIC1P78348 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
ASIC1P78348 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.19■□□□□ 0.5
ASIC1P78348 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ASIC1P78348 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ASIC1P78348 AC002347.1-201ENST00000569543 541 ntBASIC18.19■□□□□ 0.5
ASIC1P78348 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.19■□□□□ 0.5
ASIC1P78348 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.19■□□□□ 0.5
ASIC1P78348 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ASIC1P78348 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ASIC1P78348 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.19■□□□□ 0.5
ASIC1P78348 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ASIC1P78348 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ASIC1P78348 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ASIC1P78348 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ASIC1P78348 CICP6-201ENST00000457191 2729 ntBASIC18.19■□□□□ 0.5
ASIC1P78348 PMS2P7-201ENST00000506558 1336 ntBASIC18.19■□□□□ 0.5
ASIC1P78348 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.19■□□□□ 0.5
ASIC1P78348 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.19■□□□□ 0.5
ASIC1P78348 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ASIC1P78348 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ASIC1P78348 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ASIC1P78348 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
ASIC1P78348 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ASIC1P78348 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ASIC1P78348 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ASIC1P78348 CDC14C-201ENST00000428251 1719 ntBASIC18.18■□□□□ 0.5
ASIC1P78348 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.18■□□□□ 0.5
ASIC1P78348 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ASIC1P78348 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ASIC1P78348 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ASIC1P78348 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
ASIC1P78348 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms