Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 AL353807.1-201ENST00000427475 662 ntBASIC11.01□□□□□ -0.65
SNCGO76070 AC005104.2-201ENST00000427818 678 ntBASIC11.01□□□□□ -0.65
SNCGO76070 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC11.01□□□□□ -0.65
SNCGO76070 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC11.01□□□□□ -0.65
SNCGO76070 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
SNCGO76070 AC008622.2-201ENST00000617006 1229 ntBASIC11.01□□□□□ -0.65
SNCGO76070 MARS-234ENST00000630571 216 ntTSL 5 BASIC11.01□□□□□ -0.65
SNCGO76070 MARS-235ENST00000630803 183 ntTSL 3 BASIC11.01□□□□□ -0.65
SNCGO76070 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC11.01□□□□□ -0.65
SNCGO76070 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
SNCGO76070 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 COL6A4P2-202ENST00000504443 2753 ntBASIC11.01□□□□□ -0.65
SNCGO76070 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SNCGO76070 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SNCGO76070 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC11.01□□□□□ -0.65
SNCGO76070 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC11.01□□□□□ -0.65
SNCGO76070 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC11.01□□□□□ -0.65
SNCGO76070 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC11.01□□□□□ -0.65
SNCGO76070 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SNCGO76070 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SNCGO76070 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 HARS-204ENST00000438307 1789 ntTSL 2 BASIC11□□□□□ -0.65
SNCGO76070 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
SNCGO76070 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC11□□□□□ -0.65
SNCGO76070 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC11□□□□□ -0.65
SNCGO76070 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SNCGO76070 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
SNCGO76070 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
SNCGO76070 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
SNCGO76070 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC11□□□□□ -0.65
SNCGO76070 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 MTHFR-217ENST00000641820 1569 ntBASIC11□□□□□ -0.65
SNCGO76070 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11□□□□□ -0.65
SNCGO76070 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SNCGO76070 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
SNCGO76070 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 CA15P1-201ENST00000481698 905 ntBASIC11□□□□□ -0.65
SNCGO76070 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC11□□□□□ -0.65
SNCGO76070 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SNCGO76070 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SNCGO76070 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SNCGO76070 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
SNCGO76070 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 KRT16P1-201ENST00000399124 1418 ntBASIC11□□□□□ -0.65
SNCGO76070 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 AMT-206ENST00000458307 1860 ntTSL 2 BASIC11□□□□□ -0.65
SNCGO76070 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNCGO76070 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms