Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 RNF216P1-203ENST00000404404 2427 ntBASIC14.97□□□□□ -0.01
LRFN1Q9P244 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 LINC01144-201ENST00000626198 1710 ntBASIC14.97□□□□□ -0.01
LRFN1Q9P244 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRFN1Q9P244 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRFN1Q9P244 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRFN1Q9P244 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRFN1Q9P244 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRFN1Q9P244 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRFN1Q9P244 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRFN1Q9P244 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRFN1Q9P244 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRFN1Q9P244 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRFN1Q9P244 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRFN1Q9P244 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRFN1Q9P244 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRFN1Q9P244 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRFN1Q9P244 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRFN1Q9P244 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRFN1Q9P244 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRFN1Q9P244 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 LINC02560-201ENST00000596379 459 ntBASIC14.96□□□□□ -0.01
LRFN1Q9P244 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRFN1Q9P244 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.96□□□□□ -0.01
LRFN1Q9P244 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.02
LRFN1Q9P244 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LRFN1Q9P244 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.96□□□□□ -0.02
LRFN1Q9P244 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LRFN1Q9P244 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LRFN1Q9P244 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRFN1Q9P244 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRFN1Q9P244 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRFN1Q9P244 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
LRFN1Q9P244 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.95□□□□□ -0.02
LRFN1Q9P244 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
LRFN1Q9P244 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRFN1Q9P244 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.95□□□□□ -0.02
LRFN1Q9P244 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.95□□□□□ -0.02
LRFN1Q9P244 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LRFN1Q9P244 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRFN1Q9P244 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRFN1Q9P244 AC078925.2-201ENST00000624013 1973 ntBASIC14.95□□□□□ -0.02
LRFN1Q9P244 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRFN1Q9P244 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRFN1Q9P244 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
LRFN1Q9P244 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRFN1Q9P244 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRFN1Q9P244 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRFN1Q9P244 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRFN1Q9P244 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.95□□□□□ -0.02
LRFN1Q9P244 TSSK5P-201ENST00000423978 907 ntBASIC14.95□□□□□ -0.02
LRFN1Q9P244 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.95□□□□□ -0.02
LRFN1Q9P244 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRFN1Q9P244 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.95□□□□□ -0.02
LRFN1Q9P244 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.95□□□□□ -0.02
LRFN1Q9P244 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms