Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 AC067750.1-201ENST00000608826 6545 ntBASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 AC069224.1-201ENST00000566372 1715 ntBASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 AC122714.2-201ENST00000502787 707 ntBASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 AL136038.4-201ENST00000603606 1261 ntBASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 AC087481.3-201ENST00000602886 1894 ntBASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 AL021920.2-201ENST00000624828 1351 ntBASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.84□□□□□ -0.03
CROCCP3Q8IVE0 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CROCCP3Q8IVE0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CROCCP3Q8IVE0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CROCCP3Q8IVE0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CROCCP3Q8IVE0 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.03
CROCCP3Q8IVE0 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CROCCP3Q8IVE0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CROCCP3Q8IVE0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
CROCCP3Q8IVE0 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CROCCP3Q8IVE0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.83□□□□□ -0.03
CROCCP3Q8IVE0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms