Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NKX6-1P78426 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
NKX6-1P78426 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.46□□□□□ -0.1
NKX6-1P78426 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NKX6-1P78426 AC060834.1-201ENST00000443027 2032 ntBASIC14.46□□□□□ -0.1
NKX6-1P78426 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.46□□□□□ -0.1
NKX6-1P78426 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.46□□□□□ -0.1
NKX6-1P78426 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
NKX6-1P78426 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NKX6-1P78426 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NKX6-1P78426 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NKX6-1P78426 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
NKX6-1P78426 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
NKX6-1P78426 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX6-1P78426 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX6-1P78426 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NKX6-1P78426 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.45□□□□□ -0.1
NKX6-1P78426 AL512638.1-201ENST00000457493 794 ntBASIC14.45□□□□□ -0.1
NKX6-1P78426 AC125807.1-201ENST00000483097 614 ntBASIC14.45□□□□□ -0.1
NKX6-1P78426 IGHV3-42-201ENST00000520410 361 ntBASIC14.45□□□□□ -0.1
NKX6-1P78426 AC109635.5-201ENST00000533593 962 ntBASIC14.45□□□□□ -0.1
NKX6-1P78426 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX6-1P78426 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
NKX6-1P78426 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NKX6-1P78426 MIR3909-201ENST00000579518 119 ntBASIC14.45□□□□□ -0.1
NKX6-1P78426 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.45□□□□□ -0.1
NKX6-1P78426 CYP2A7P1-201ENST00000595391 815 ntBASIC14.45□□□□□ -0.1
NKX6-1P78426 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.45□□□□□ -0.1
NKX6-1P78426 AP001059.3-201ENST00000619053 235 ntBASIC14.45□□□□□ -0.1
NKX6-1P78426 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX6-1P78426 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
NKX6-1P78426 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-1P78426 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
NKX6-1P78426 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NKX6-1P78426 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-1P78426 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
NKX6-1P78426 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NKX6-1P78426 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.44□□□□□ -0.1
NKX6-1P78426 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-1P78426 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-1P78426 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-1P78426 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
NKX6-1P78426 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-1P78426 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX6-1P78426 RNU1-129P-201ENST00000384064 167 ntBASIC14.44□□□□□ -0.1
NKX6-1P78426 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX6-1P78426 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX6-1P78426 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.44□□□□□ -0.1
NKX6-1P78426 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-1P78426 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.44□□□□□ -0.1
NKX6-1P78426 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.44□□□□□ -0.1
NKX6-1P78426 U1.21-201ENST00000580816 167 ntBASIC14.44□□□□□ -0.1
NKX6-1P78426 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.44□□□□□ -0.1
NKX6-1P78426 AL009183.1-201ENST00000603760 355 ntBASIC14.44□□□□□ -0.1
NKX6-1P78426 AC099522.2-201ENST00000607001 744 ntBASIC14.44□□□□□ -0.1
NKX6-1P78426 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.44□□□□□ -0.1
NKX6-1P78426 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-1P78426 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-1P78426 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-1P78426 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-1P78426 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.44□□□□□ -0.1
NKX6-1P78426 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX6-1P78426 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-1P78426 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-1P78426 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-1P78426 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
NKX6-1P78426 LINC00895-201ENST00000629028 1637 ntBASIC14.44□□□□□ -0.1
NKX6-1P78426 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-1P78426 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.44□□□□□ -0.1
NKX6-1P78426 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.44□□□□□ -0.1
NKX6-1P78426 PCDHB17P-201ENST00000539533 2393 ntBASIC14.44□□□□□ -0.1
NKX6-1P78426 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.44□□□□□ -0.1
NKX6-1P78426 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.44□□□□□ -0.1
NKX6-1P78426 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-1P78426 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NKX6-1P78426 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.44□□□□□ -0.1
NKX6-1P78426 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-1P78426 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX6-1P78426 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
NKX6-1P78426 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms