Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SMSP52788 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
SMSP52788 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SMSP52788 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SMSP52788 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SMSP52788 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SMSP52788 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SMSP52788 AC063926.3-201ENST00000624734 5658 ntBASIC15.36■□□□□ 0.05
SMSP52788 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SMSP52788 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SMSP52788 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SMSP52788 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SMSP52788 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
SMSP52788 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SMSP52788 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SMSP52788 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.36■□□□□ 0.05
SMSP52788 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SMSP52788 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
SMSP52788 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SMSP52788 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SMSP52788 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
SMSP52788 LINC00982-205ENST00000420957 435 ntBASIC15.36■□□□□ 0.05
SMSP52788 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.36■□□□□ 0.05
SMSP52788 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
SMSP52788 CXCL1P1-201ENST00000502804 216 ntBASIC15.36■□□□□ 0.05
SMSP52788 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SMSP52788 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SMSP52788 SPCS2P1-201ENST00000561636 679 ntBASIC15.36■□□□□ 0.05
SMSP52788 AC068137.2-201ENST00000605408 478 ntBASIC15.36■□□□□ 0.05
SMSP52788 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
SMSP52788 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SMSP52788 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SMSP52788 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SMSP52788 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SMSP52788 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.36■□□□□ 0.05
SMSP52788 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.36■□□□□ 0.05
SMSP52788 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.36■□□□□ 0.05
SMSP52788 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SMSP52788 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SMSP52788 AC105917.1-201ENST00000506637 2539 ntBASIC15.36■□□□□ 0.05
SMSP52788 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.35■□□□□ 0.05
SMSP52788 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.35■□□□□ 0.05
SMSP52788 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
SMSP52788 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.35■□□□□ 0.05
SMSP52788 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.35■□□□□ 0.05
SMSP52788 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.35■□□□□ 0.05
SMSP52788 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 AC132872.4-202ENST00000622924 2756 ntBASIC15.35■□□□□ 0.05
SMSP52788 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.35■□□□□ 0.05
SMSP52788 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.35■□□□□ 0.05
SMSP52788 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.35■□□□□ 0.05
SMSP52788 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 AC092474.2-201ENST00000424288 719 ntBASIC15.35■□□□□ 0.05
SMSP52788 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.35■□□□□ 0.05
SMSP52788 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.35■□□□□ 0.05
SMSP52788 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.35■□□□□ 0.05
SMSP52788 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.35■□□□□ 0.05
SMSP52788 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SMSP52788 REXO1L3P-201ENST00000622202 1288 ntBASIC15.35■□□□□ 0.05
SMSP52788 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.35■□□□□ 0.05
SMSP52788 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.35■□□□□ 0.05
SMSP52788 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.35■□□□□ 0.05
SMSP52788 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.35■□□□□ 0.05
SMSP52788 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.35■□□□□ 0.05
SMSP52788 MST1L-201ENST00000442552 2185 ntBASIC15.35■□□□□ 0.05
SMSP52788 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.35■□□□□ 0.05
SMSP52788 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SMSP52788 TSPY26P-202ENST00000565928 3884 ntBASIC15.35■□□□□ 0.05
SMSP52788 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.35■□□□□ 0.05
SMSP52788 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
SMSP52788 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.34■□□□□ 0.05
SMSP52788 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.34■□□□□ 0.05
SMSP52788 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.34■□□□□ 0.05
SMSP52788 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SMSP52788 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.34■□□□□ 0.05
SMSP52788 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SMSP52788 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SMSP52788 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SMSP52788 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SMSP52788 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SMSP52788 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms